Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20] 77,320 sequences; 2,650,836,958 total letters Query= AAMG01001571.1 Length=521 Score E Sequences producing significant alignments: (Bits) Value seq55352 771 0.0 >seq55352 Length=149869 Score = 771 bits (854), Expect = 0.0 Identities = 435/440 (99%), Gaps = 0/440 (0%) Strand=Plus/Minus Query 82 CTCTCCTCTCTCCTTAGTGAGGTGAAACGGGATTGAGATACGGGCTTAGGGTTGAGGACC 141 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 55076 CTCTACTCTCTCCTTAGTGAGGTGAAACGGGATTGAGATACGGGCTTAGGGTTGAGGACC 55017 Query 142 CATTGAGGGCTCTTGAAGCTCGGTCACGTCGCTGTCAGTGCGACGACCTTTGCCATGTGC 201 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 55016 CATTGAGGGCTCTTGAAGCTCGGTCACGTCGCTGTCAGTGCGACTACCTTTGCCATGTGC 54957 Query 202 CCAGGCTTGCGGACCACAGCGGCCAGCATTAAGCCAATCGCCGGGGAGACCAAAAGGGTT 261 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 54956 CCAGGCTTGCGGACCACAGCGGCCAGCATTAAGCCAATCGCCGGGGAGACCAAAAGGGTT 54897 Query 262 TCATAGCGAGCCTGTGAGGCGTTCAGGTAGAAACCATGCTCGGCCACAACGTCACCGGGA 321 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 54896 TCATAGCGAGCCTGTGAGGCGTTCAGGTAGAAACCATGCTCGGCCACAACGTCACCGGGA 54837 Query 322 AAGGACGGGTGAGGACTGGCCAAGGTCCAACGAAAACCGCCAAGGTGTGGCGCTTTGATC 381 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct 54836 AAGGACGGGTGAGGACTGGTCAAGGTCCAACGAAAACCGCCAAGGTGTGGCGCTTTGGTC 54777 Query 382 ACCGCGCCGGATTCTTCAAGGTTGTTCAGAATGATCTCAGCGCGGTCCTTAACGGTTCGG 441 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 54776 ACTGCGCCGGATTCTTCAAGGTTGTTCAGAATGATCTCAGCGCGGTCCTTAACGGTTCGG 54717 Query 442 TGTTCACCGCCCAGGGTGATAGCGATAGCGTGGGTTGCGGTCATCTGTGTGGTTGTCATA 501 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 54716 TGTTCACCGCCCAGGGTGATAGCGATAGCGTGGGTTGCGGTCATCTGTGTGGTTGTCATA 54657 Query 502 AGGGTTCTCCTTTTAGAGGT 521 |||||||||||||||||||| Sbjct 54656 AGGGTTCTCCTTTTAGAGGT 54637 Score = 98.7 bits (108), Expect = 3e-18 Identities = 60/64 (94%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 57 TCAATAAGGGACCATCAGGGAGGGTCTCTCCTCTCTCCTTAGTGAGGTGAAACGGGATTG 116 ||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 58000 TCATTAAGGGACCATCAGGGAGGGTCTCTCCTCTCTCCTTAGTGAGGGGATCCGGGATTG 57941 Query 117 AGAT 120 |||| Sbjct 57940 AGAT 57937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1563590096640