Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq25624 342 2e-91
seq54258 313 8e-83
seq36351 228 3e-57
seq62282 172 2e-40
seq40920 159 1e-36
seq73735 118 3e-24
seq8210 105 2e-20
seq17407 102 3e-19
seq17884 98.7 3e-18
seq74651 96.9 1e-17
seq68954 96.9 1e-17
seq58749 93.3 1e-16
seq70241 91.5 5e-16
seq530 91.5 5e-16
seq76631 86.0 2e-14
seq69372 86.0 2e-14
>seq25624
Length=1691541
Score = 342 bits (378), Expect = 2e-91
Identities = 256/298 (86%), Gaps = 3/298 (1%)
Strand=Plus/Minus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|||||||||||||||||||||||| ||| ||||| | |||||||||||| ||||
Sbjct 1154270 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACCTTCCCACACTAGAGTCAAGTTCAA 1154211
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
|||||||||||||||||||||||| ||||||||| |||||||||||||||||||| | |
Sbjct 1154210 TAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCATTCCCTTGGCTGTGGTTTCGATGG 1154151
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||||||| ||| ||||||||||||||| | |||||||| || | ||||||||| |||||
Sbjct 1154150 ATAGTAGGTAGAGACAGTGGGAATCTC--TCATCCATTCGTGTGAGTCACTAATCAGATG 1154093
Query 417 ACGAGGCA-TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTG 475
|| ||||| |||||||| |||||||||||||| |||||||| ||| ||| | | ||||
Sbjct 1154092 ACAAGGCATTTTGGCTATCTTAAGAGAGTCATGGTTACTCCTGCCACTTAGCGGTGCTTC 1154033
Query 476 GTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
| | |||||||||||||||||||||| |||||||||||||||||||| || ||||||
Sbjct 1154032 ATGGTATTTCTTCACTTTGACATTCAGGGCACTGGGCAGAAATCACATCGCATCAACA 1153975
>seq54258
Length=302827
Score = 313 bits (346), Expect = 8e-83
Identities = 250/300 (83%), Gaps = 1/300 (0%)
Strand=Plus/Minus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|||||||||| |||| |||||||| || || || | | ||||||||||||||||||
Sbjct 100096 CTCCCACTTACTCTATACCTCTCATATCTCTTTACTGTGCCAGACTAGAGTCAAGCTCAA 100037
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
|| |||||||||||| | |||||| |||||||| ||||| |||||||||||||| || |
Sbjct 100036 CAATGTCTTCTTTCCCAGATGATTCGGCCAAGCCTGTTCCTTTGGCTGTGGTTTC-CTGG 99978
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||||||| |||||||| ||||||||| ||| |||||||||| || ||| |||||| |||
Sbjct 99977 ATAGTAGGTAGGGACAATGGGAATCTGGTTCATCCATTCATCTGCATCAGTAATTACATG 99918
Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476
| ||||| ||||||| |||||||||||||| ||||||||| || ||||| || |||
Sbjct 99917 ATGAGGCTTTTGGCTCTCTTAAGAGAGTCATCGTTACTCCCACCAGTTACCTGCCCTTCA 99858
Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCA 536
||||||||||| ||| |||||||||| |||||| ||||||||||||| ||||||| ||
Sbjct 99857 TTGAATTTCTTTACTATGACATTCAGTGCACTGAGCAGAAATCACATCAGGTCAACACCA 99798
>seq36351
Length=2866441
Score = 228 bits (252), Expect = 3e-57
Identities = 174/206 (84%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
||||||||||||||||| ||||| ||| ||||| | | | ||||||||||||| ||||
Sbjct 2483715 CTCCCACTTATTCTACATGTCTCAGGTCTCTTCACCATGCCAGACTAGAGTCAAGTTCAA 2483774
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
||||||||||||||| |||||||| || | || ||||||||||||||||||| |||||
Sbjct 2483775 TAGGGTCTTCTTTCCCTGCTGATTCTGCTACACCTGTTCCCTTGGCTGTGGTTTTGCTAG 2483834
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||||||| |||||||| ||||| |||| || ||||||||||| |||||||| || ||
Sbjct 2483835 ATAGTAGGTAGGGACAATGGGAGTCTCCTTCATCCATTCATGGATGTCACTAACTATATA 2483894
Query 417 ACGAGGCATTTGGCTACCTTAAGAGA 442
| ||||||| | ||||||||||||||
Sbjct 2483895 ATGAGGCATCTAGCTACCTTAAGAGA 2483920
>seq62282
Length=2733176
Score = 172 bits (190), Expect = 2e-40
Identities = 125/144 (87%), Gaps = 3/144 (2%)
Strand=Plus/Minus
Query 356 GATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 415
|| || || |||||||||||||||||||||| || |||||||||| |||| ||||| |||
Sbjct 1689810 GACAGGAGGTAGGGACAGTGGGAATCTCGTTCATTCATTCATGCGTGTCATTAATTGGAT 1689751
Query 416 GACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTG 475
|| |||| |||||||||||||||||||||||||||||||||| |||||||| | ||
Sbjct 1689750 GATGAGGTATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCACCGTTTAC---CACTCC 1689694
Query 476 GTTGAATTTCTTCACTTTGACATT 499
|||||||||||||||| ||||||
Sbjct 1689693 ATTGAATTTCTTCACTTCGACATT 1689670
>seq40920
Length=1186382
Score = 159 bits (176), Expect = 1e-36
Identities = 123/146 (84%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|||||||||||||| ||||||||| || ||||| | | ||||||| || |||||
Sbjct 1145490 CTCCCACTTATTCTGCACCTCTCATTTCTCTTCACCATGCTAGACTAGAAGCAGTCTCAA 1145431
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
|||||| |||| |||| |||||||| ||||||||| ||||| ||||||||||||| || |
Sbjct 1145430 CAGGGTTTTCTCTCCCTGCTGATTCAGCCAAGCCCATTCCCGTGGCTGTGGTTTCACTGG 1145371
Query 357 ATAGTAGATAGGGACAGTGGGAATCT 382
||||||| ||||||||||||||||||
Sbjct 1145370 ATAGTAGGTAGGGACAGTGGGAATCT 1145345
>seq73735
Length=608513
Score = 118 bits (130), Expect = 3e-24
Identities = 88/102 (86%), Gaps = 1/102 (1%)
Strand=Plus/Minus
Query 348 TTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACT 407
||| ||| ||||||| | |||||||||||||||||| | |||||| || | | |||||
Sbjct 352154 TTTTGCTGGATAGTAAAAAGGGACAGTGGGAATCTCACTCATCCATACACACACATCACT 352095
Query 408 AATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAG 449
|||||||||| ||||||||| |||||||||||||||||||||
Sbjct 352094 AATTAGATGATGAGGCATTT-GCTACCTTAAGAGAGTCATAG 352054
>seq8210
Length=1738640
Score = 105 bits (116), Expect = 2e-20
Identities = 117/152 (77%), Gaps = 3/152 (2%)
Strand=Plus/Minus
Query 372 AGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCT 431
|||| |||||| | | || |||||| | ||| || |||||||||||| || || ||||
Sbjct 1450317 AGTGAGAATCTTGGTCATGAATTCATACATGTCTCTGATTAGATGACGAAGCGTT-GGCT 1450259
Query 432 ACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACT 491
||||||||||| ||||||||||| ||| |||| ||| |||||||||||||||
Sbjct 1450258 ACCTTAAGAGATTCATAGTTACTGT-GCCATTTATTTAA-CTTCATTGAATTTCTTCACT 1450201
Query 492 TTGACATTCAGAGCACTGGGCAGAAATCACAT 523
||||||| | | |||||||| ||| || ||
Sbjct 1450200 CTGACATTGAATGTACTGGGCAAAAACCATAT 1450169
>seq17407
Length=230093
Score = 102 bits (112), Expect = 3e-19
Identities = 73/84 (87%), Gaps = 0/84 (0%)
Strand=Plus/Plus
Query 259 CAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGA 318
|| ||| ||||| | ||||||| |||||||||||||||||||||||||||| |||||
Sbjct 198057 CATGTCTCTTCACCGTGCCGGACTACAGTCAAGCTCAACAGGGTCTTCTTTCCCTGCTGA 198116
Query 319 TTCCGCCAAGCCCGTTCCCTTGGC 342
|||||||| ||||||||||||||
Sbjct 198117 CTCCGCCAAACCCGTTCCCTTGGC 198140
>seq17884
Length=327165
Score = 98.7 bits (108), Expect = 3e-18
Identities = 86/107 (80%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||||||||||| | |||||||||| |||| |||||||| ||||| ||||
Sbjct 46849 CTTCTGCTCTACAGGAGGTCTCTGTTCTCCCTGAGCTTACCTTAGGATACCTGTGTTACC 46790
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113
||| |||| ||| || |||||| ||||||||| ||||| || ||||
Sbjct 46789 ATTTGACAGGTGTACCACCCCAGTCAAACTCCCAACCTGGCACTGTC 46743
>seq74651
Length=10944
Score = 96.9 bits (106), Expect = 1e-17
Identities = 117/158 (74%), Gaps = 1/158 (1%)
Strand=Plus/Plus
Query 286 GTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGT 345
|||| | ||||||| ||| |||| || | || | ||||| || ||| |||||||||
Sbjct 1036 GTCAGGTTCAACAGAGTCCTCTTCATCCACAGACTTTGCCAAACCA-TTCTCTTGGCTGT 1094
Query 346 GGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCA 405
||||| ||| | ||| | || ||| ||||| | || ||||||||||| |||
Sbjct 1095 AGTTTCATCAGAAAATAGGTGAAGAGAGTAGGAATACCATTCTTCCATTCATGCATGTCT 1154
Query 406 CTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAG 443
||||||||||| |||| |||| || ||||||||||||
Sbjct 1155 CTAATTAGATGCTGAGGAATTTAGCCACCTTAAGAGAG 1192
>seq68954
Length=2242761
Score = 96.9 bits (106), Expect = 1e-17
Identities = 117/158 (74%), Gaps = 1/158 (1%)
Strand=Plus/Plus
Query 286 GTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGT 345
|||| | ||||||| ||| |||| || | || | ||||| || ||| |||||||||
Sbjct 634724 GTCAGGTTCAACAGAGTCCTCTTCATCCACAGACTTTGCCAAACCA-TTCTCTTGGCTGT 634782
Query 346 GGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCA 405
||||| ||| | ||| | || ||| ||||| | || ||||||||||| |||
Sbjct 634783 AGTTTCATCAGAAAATAGGTGAAGAGAGTAGGAATACCATTCTTCCATTCATGCATGTCT 634842
Query 406 CTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAG 443
||||||||||| |||| |||| || ||||||||||||
Sbjct 634843 CTAATTAGATGCTGAGGAATTTAGCCACCTTAAGAGAG 634880
>seq58749
Length=2680103
Score = 93.3 bits (102), Expect = 1e-16
Identities = 84/106 (79%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 8 TTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGG 67
|| ||| | ||| ||| ||||||| |||| | || | ||| |||||||||| ||||
Sbjct 1468207 TTCTGCCCCACAAGAGGTTTCTGTCCTCCCTAAGCTCGCCTCAGGACACCTGTGTTACCA 1468148
Query 68 TTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113
||| |||| ||| ||||||||| ||||||||||||||| || ||||
Sbjct 1468147 TTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCACTGTC 1468102
>seq70241
Length=651318
Score = 91.5 bits (100), Expect = 5e-16
Identities = 74/87 (85%), Gaps = 2/87 (2%)
Strand=Plus/Minus
Query 374 TGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTAC 433
|||||| ||| || ||||||||||| || |||||||| |||||| ||| ||||| |||
Sbjct 94952 TGGGAAGCTC-TTCATCCATTCATGTGCA-CACTAATTGGATGACCAGGAATTTGAGTAC 94895
Query 434 CTTAAGAGAGTCATAGTTACTCCCGCC 460
||||| ||||||||||||||||| |||
Sbjct 94894 CTTAAAAGAGTCATAGTTACTCCTGCC 94868
>seq530
Length=1928495
Score = 91.5 bits (100), Expect = 5e-16
Identities = 92/121 (76%), Gaps = 13/121 (11%)
Strand=Plus/Plus
Query 406 CTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTA 465
|||||||||||| ||||||||||||||||| ||||| | |||||||| | | ||||
Sbjct 14949 CTAATTAGATGATAAGGCATTTGGCTACCTTGAGAGATTGTTAGTTACTTTCATCATTTA 15008
Query 466 CCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTG 525
|| ||| ||||||||||||||||||| |||| ||||||||||| | ||
Sbjct 15009 CC----------AGAA---CTTCACTTTGACATTCAGAACACTAGGCAGAAATCATACTG 15055
Query 526 C 526
|
Sbjct 15056 C 15056
>seq76631
Length=1025911
Score = 86.0 bits (94), Expect = 2e-14
Identities = 76/95 (80%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| | ||||| ||||||| |||| |||| | |||||||||||| | ||||
Sbjct 107124 CTTATGCTCCATAGGAGGTTTCTGTCCTCCCTGAGCTCACCTTAGGACACCCGTGTTACA 107183
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCA 101
|||| |||| ||| || |||||| ||||||| |||
Sbjct 107184 GTTTGACAGGTGTACCACCCCAGTCAAACTCTCCA 107218
>seq69372
Length=439374
Score = 86.0 bits (94), Expect = 2e-14
Identities = 83/107 (78%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| || || | |||| ||||||| ||| |||| |||||||||||||||||||
Sbjct 17463 CTTCTGTTCCATGGGAGGTTTCTGTCCTCTCTGAGCTTGCCTTAGGACACCTGCGTTACT 17522
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113
|||| |||| ||| | ||||||| || |||||| ||||| || ||||
Sbjct 17523 GTTTGACAGGTGTACTGCCCCAGTCAGACTCCCTACCTGGCACTGTC 17569
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1633935663360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |