Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq21172 86.0 1e-14
seq23585 84.2 4e-14
seq63916 77.0 5e-12
seq40920 77.0 5e-12
>seq21172
Length=24160
Score = 86.0 bits (94), Expect = 1e-14
Identities = 76/94 (81%), Gaps = 1/94 (1%)
Strand=Plus/Plus
Query 21 TTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGC 80
|||||| | ||||| | || | || |||| || || || ||||||||||||||||
Sbjct 13447 TTCAGAC-ATTTGGTGTATGTGCTTGGCTGAGGAGCCAATGGGGCGAAGCTACCATCTGT 13505
Query 81 TGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
|||||||| ||||||||||||||||||||||||
Sbjct 13506 AGGATTATGACTGAACGCCTCTAAGTCAGAATCC 13539
>seq23585
Length=371847
Score = 84.2 bits (92), Expect = 4e-14
Identities = 73/91 (80%), Gaps = 0/91 (0%)
Strand=Plus/Plus
Query 31 TTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGG 90
||||| |||| | || |||| || || || || ||||||| ||||| ||||||||
Sbjct 154551 TTGGTATTTGTGCTTGGCTGAGGAGCCAATGGGGCAAAGCTACTATCTGTGGGATTATGA 154610
Query 91 CTGAACGCCTCTAAGTCAGAATCCATGCCAG 121
||||||||||||||||||||||||| ||||
Sbjct 154611 CTGAACGCCTCTAAGTCAGAATCCAACCCAG 154641
>seq63916
Length=1694157
Score = 77.0 bits (84), Expect = 5e-12
Identities = 87/114 (76%), Gaps = 2/114 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||| ||||||||| | | ||||| | ||||| | || | || |||| || || |
Sbjct 1675647 GTACAAGAGGAACCACAGG-TTCAGGC-ATTTGGTGTATGTGCTTGGCTGAGAAGCCAAT 1675590
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||||||||||||| | |||||||| || || ||||||||||||||||||
Sbjct 1675589 GGGGCGAAGCTACCATCCGTGGGATTATGACTAAATGCCTCTAAGTCAGAATCC 1675536
>seq40920
Length=1186382
Score = 77.0 bits (84), Expect = 5e-12
Identities = 87/114 (76%), Gaps = 2/114 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||| ||||||||| |||| |||||| | ||||| | || | || |||| || | |
Sbjct 1146101 GTAGGAGAGGAACTGCGGG-TTCAGAC-ATTTGGTGTATGTGCTTGGCTGAGGAGTAAAT 1146158
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| | ||||||||||||| |||||||| ||||| ||||| ||||||||||||
Sbjct 1146159 GGGTCAAAGCTACCATCTGTGGGATTATGACTGAATGCCTCCAAGTCAGAATCC 1146212
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 818586388480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |