Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq43885 210 7e-52
seq5492 143 8e-32
seq26182 134 4e-29
seq74847 113 1e-22
seq46775 113 1e-22
seq6813 109 2e-21
seq31645 105 2e-20
seq70997 96.9 1e-17
seq43838 96.9 1e-17
seq24380 96.9 1e-17
seq38788 87.8 5e-15
seq71067 86.0 2e-14
seq6730 86.0 2e-14
seq20852 82.4 2e-13
seq43769 80.6 8e-13
seq69546 78.8 3e-12
seq47535 78.8 3e-12
seq36114 77.0 1e-11
>seq43885
Length=2353850
Score = 210 bits (232), Expect = 7e-52
Identities = 182/221 (82%), Gaps = 5/221 (2%)
Strand=Plus/Minus
Query 8 TTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCGT 66
||||||| ||| | || | ||||| ||||||| ||||| | |||||||||||||| |
Sbjct 461466 TTCCAATGACAGGGCCTCGAAAGAATCCTGTATTGTTATTTTTCGTCACTACCTCCCCCT 461407
Query 67 GTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAG 126
|| |||| |||||||||||| | |||||||||||||||||||||| ||||| ||||||||
Sbjct 461406 GTTGGGAGTGGGTAATTTGCACACCTGCTGCCTTCCTTGGATGTGCTAGCCATTTCTCAG 461347
Query 127 GCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGG-CCA 185
||||| |||| ||||||||||||| ||||||| | |||| | | |||| | |||| ||
Sbjct 461346 GCTCCATCTCTGGAATCGAACCCTGATTCCCCATCACCCATGGTCACCAAGATAGGTACA 461287
Query 186 CT-ATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAAT 225
| || |||||||| ||||||||| |||||| ||||||||
Sbjct 461286 GTGAT--TACCATCGCAAGTTGATAAGGCAGACATTTGAAT 461248
>seq5492
Length=1073270
Score = 143 bits (158), Expect = 8e-32
Identities = 99/111 (89%), Gaps = 1/111 (1%)
Strand=Plus/Plus
Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61
|||||||||||||||| | || | |||||| ||||||| ||||| | |||||||||||
Sbjct 1006850 ACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACCTC 1006909
Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGG 112
|||| ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1006910 CCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGG 1006960
>seq26182
Length=304988
Score = 134 bits (148), Expect = 4e-29
Identities = 85/92 (92%), Gaps = 0/92 (0%)
Strand=Plus/Minus
Query 92 TGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTA 151
|| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 60547 TGTTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCTGGAATCGAACCCTG 60488
Query 152 ATTCCCCGTTACCCGTTGATACCATGGTAGGC 183
||||||||| |||||| | ||||||||||||
Sbjct 60487 ATTCCCCGTCACCCGTGGTCACCATGGTAGGC 60456
>seq74847
Length=1238004
Score = 113 bits (124), Expect = 1e-22
Identities = 94/112 (84%), Gaps = 5/112 (4%)
Strand=Plus/Minus
Query 395 CAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAG--ATTGCTTA 452
||||| | | ||||||||||||||||| || | ||| |||||||||| | | ||| |
Sbjct 824280 CAAATGAGCCATAACTGATTTAATGAGTTATCCACAGATTCACTGTATTGGGAGTGC--A 824223
Query 453 TACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|||||||| ||| ||||||||||||||||||||||||| || ||||||||||
Sbjct 824222 TACTTAGATATGTATGGCTTAATCTTTGAGACAAGCATGTG-CTACTGGCAG 824172
>seq46775
Length=1724329
Score = 113 bits (124), Expect = 1e-22
Identities = 93/112 (83%), Gaps = 1/112 (1%)
Strand=Plus/Plus
Query 393 ATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTA 452
|||||| | | |||||||||||||||||| ||| |||||||||||| | || | |
Sbjct 597979 ATCAAAGGAGCCATAACTGATTTAATGAGCTATTTGCAGTTTCACTGCACAGTTCATGTG 598038
Query 453 TACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|||||||| ||| |||||||||| | ||||||||||||||| ||||||||||
Sbjct 598039 TACTTAGATATGGATGGCTTAATATGTGAGACAAGCATATG-CTACTGGCAG 598089
>seq6813
Length=3341543
Score = 109 bits (120), Expect = 2e-21
Identities = 87/104 (84%), Gaps = 3/104 (3%)
Strand=Plus/Minus
Query 34 CTGTATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTG 93
|||||| || || |||||||| |||||| | ||| ||| | ||||||||| |||||
Sbjct 1296108 CTGTAT---TACTTTTTGTCACTCCCTCCCTGGGTCAGGAGAGAGTAATTTGCCTGCCTG 1296052
Query 94 CTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCC 137
|||||||||||| | ||||||||| |||||||||||||||||||
Sbjct 1296051 CTGCCTTCCTTGAAGGTGGTAGCCATTTCTCAGGCTCCCTCTCC 1296008
>seq31645
Length=933769
Score = 105 bits (116), Expect = 2e-20
Identities = 63/66 (95%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 75 TGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTC 134
||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 318071 TGGGTAATTTGTGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCATTTCTCAGGCTCCCTC 318012
Query 135 TCCGGA 140
||| ||
Sbjct 318011 TCCAGA 318006
>seq70997
Length=565896
Score = 96.9 bits (106), Expect = 1e-17
Identities = 89/113 (79%), Gaps = 15/113 (13%)
Strand=Plus/Minus
Query 395 CAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCA---CTGTATAGATTGCTT 451
|||| ||| ||||||||||||||||||||| | |||| || ||| |
Sbjct 137380 CAAAGGAACCATAACTGATTTAATGAGCCATCCACAGTACCAGCCCTG-----------T 137332
Query 452 ATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct 137331 GTACTTAGACATGCATGGCTTAATCTTTGAGATAAGCATATG-CTACTGGCAG 137280
>seq43838
Length=1620096
Score = 96.9 bits (106), Expect = 1e-17
Identities = 118/153 (77%), Gaps = 11/153 (7%)
Strand=Plus/Plus
Query 356 TCTAGAATTACCACGGTTATCCATGTAGTAAGGT-ACT-ATCAAATAAACGATAACTGAT 413
||||||| ||||| |||||||| | || | || | | | |||| ||| |||||||||
Sbjct 1456744 TCTAGAACTACCA--GTTATCCAAGAAGAAGAGTGAGTGACCAAAGGAACCATAACTGAT 1456801
Query 414 TTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTAT--ACTTAGACATGCATGGCT 471
| ||||||| | | |||||||||||| | || ||| |||||||||||||| | |
Sbjct 1456802 T-AATGAGCAAGCCACAGTTTCACTGTTTCA---GCCTATGCACTTAGACATGCATAGGT 1456857
Query 472 TAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|||| |||||||||||||| || || |||||||
Sbjct 1456858 TAATTTTTGAGACAAGCATGTG-CTGCTGGCAG 1456889
>seq24380
Length=2264173
Score = 96.9 bits (106), Expect = 1e-17
Identities = 82/100 (82%), Gaps = 1/100 (1%)
Strand=Plus/Plus
Query 405 ATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATG 464
|||||||||||||||||| |||||||||||| |||| | | |||||||||||
Sbjct 748124 ATAACTGATTTAATGAGCTGTTCGCAGTTTCAGTGTACTGGCCATATGTACTTAGACATT 748183
Query 465 CATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||| ||||||||||||||||||| ||||| |||||| ||
Sbjct 748184 CATAGCTTAATCTTTGAGACAAGTATATG-TTACTGGTAG 748222
>seq38788
Length=418965
Score = 87.8 bits (96), Expect = 5e-15
Identities = 105/142 (74%), Gaps = 8/142 (6%)
Strand=Plus/Plus
Query 90 CCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCC 149
|||||||||||||||| |||||| |||| || ||||||||||||||| || || |||||
Sbjct 195928 CCTGCTGCCTTCCTTGAATGTGGGAGCCATTAATCAGGCTCCCTCTCCTGACTCAAACCC 195987
Query 150 TAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATA 209
| ||||||| | || | ||| |||| | | |||||||| || | ||||
Sbjct 195988 TGATTCCCCATCAC----TCATAAGTAGGTATGAGA----ACTACCATCAAAGGCTGATT 196039
Query 210 GGGCAGAAATTTGAATGAACCA 231
|||| | | ||||||||| ||
Sbjct 196040 AGGCAAACACTTGAATGAATCA 196061
>seq71067
Length=1635474
Score = 86.0 bits (94), Expect = 2e-14
Identities = 86/110 (78%), Gaps = 5/110 (5%)
Strand=Plus/Minus
Query 395 CAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATA 454
|||| ||| |||| |||| |||||||||| |||||||||||| || || | |
Sbjct 1610707 CAAAGGAACCGTAACCGATTCTGTGAGCCATTC--AGTTTCACTGTACTGACTGTGTGTT 1610650
Query 455 CTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||| |||||||| ||||| |||||||| ||||||||||
Sbjct 1610649 CTTAGACATGCACGGCTTAATATTTGAAACAAGCAT---GCTACTGGCAG 1610603
>seq6730
Length=1569464
Score = 86.0 bits (94), Expect = 2e-14
Identities = 72/87 (83%), Gaps = 1/87 (1%)
Strand=Plus/Minus
Query 407 AACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCA 466
||||| || || |||| ||| |||||||||||| | | ||| | |||||||||||
Sbjct 769377 AACTGCTTGAAAGAGCTATTTGCAGTTTCACTGCACTGGTTGTGCGTT-TTAGACATGCA 769319
Query 467 TGGCTTAATCTTTGAGACAAGCATATG 493
|||||||||||||||||||||||||||
Sbjct 769318 TGGCTTAATCTTTGAGACAAGCATATG 769292
>seq20852
Length=254887
Score = 82.4 bits (90), Expect = 2e-13
Identities = 103/137 (75%), Gaps = 11/137 (8%)
Strand=Plus/Minus
Query 371 GTTATCCA--TGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCG 428
|| ||||| || | ||| | || | |||| ||| |||||||||| ||||| | ||
Sbjct 112220 GTAATCCAGTTGCAATAATGAACAACCAAAGGAACTGTAACTGATTTGTTGAGCTACACG 112161
Query 429 CAGTTTCACTGTA-TAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAG 487
||||||||||||| || || | | ||| ||||||||||||||||||||||||
Sbjct 112160 CAGTTTCACTGTACCAG---GC----AGGCATACACGCATGGCTTAATCTTTGAGACAAG 112108
Query 488 CATATGACTACTGGCAG 504
|||| | ||||||||||
Sbjct 112107 CATA-GGCTACTGGCAG 112092
>seq43769
Length=1691439
Score = 80.6 bits (88), Expect = 8e-13
Identities = 79/100 (79%), Gaps = 3/100 (3%)
Strand=Plus/Minus
Query 405 ATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATG 464
||| |||||| ||||||| ||| || |||||||| | || | ||| || ||||
Sbjct 1317052 ATAGCTGATTCAATGAGCTATTAGCTGTTTCACTACTGGCAGTG--TGTACCTACACATA 1316995
Query 465 CATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
| ||||||||||| ||||||||||||||| ||||||||||
Sbjct 1316994 CCTGGCTTAATCTCTGAGACAAGCATATG-CTACTGGCAG 1316956
>seq69546
Length=341051
Score = 78.8 bits (86), Expect = 3e-12
Identities = 78/98 (80%), Gaps = 5/98 (5%)
Strand=Plus/Plus
Query 407 AACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCA 466
|||||||||||||||| || ||||||||| |||| | || || | || |||||
Sbjct 21524 AACTGATTTAATGAGCTATCTGCAGTTTCATTGTACTG---GCC-ATGCACAGTTATGCA 21579
Query 467 TGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||| |||||| |||||||||
Sbjct 21580 CGGCTTAATCTTTGAGACAACCATATG-TTACTGGCAG 21616
>seq47535
Length=2671866
Score = 78.8 bits (86), Expect = 3e-12
Identities = 72/91 (79%), Gaps = 0/91 (0%)
Strand=Plus/Plus
Query 26 AAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTG 85
|||||| | | ||| ||||| ||||||||||||| ||| ||| |||||||||||
Sbjct 131315 AAAGAGTCTTATATTGTTATTTTCCATCACTACCTCCCCTGGTCAGGAGTGGGTAATTTG 131374
Query 86 CGCGCCTGCTGCCTTCCTTGGATGTGGTAGC 116
| | | ||||| ||| |||||||||||||||
Sbjct 131375 CACTCTTGCTGTCTTTCTTGGATGTGGTAGC 131405
>seq36114
Length=1464811
Score = 77.0 bits (84), Expect = 1e-11
Identities = 84/110 (76%), Gaps = 5/110 (5%)
Strand=Plus/Minus
Query 395 CAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATA 454
|||| |||| |||| |||| |||||||| | ||||||||| |||| | | |||
Sbjct 13492 CAAAGAAACCATAATTGATCTAATGAGCTGTCTGCAGTTTCATTGTACTGGCCACACATA 13433
Query 455 CTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||| |||||||| ||||||||||||||||||||| |||||||||
Sbjct 13432 CTTTC----GCATGGCTGAATCTTTGAGACAAGCATATG-TTACTGGCAG 13388
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1509232158720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |