Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balaenoptera_20acutorostrata_20scammoni_20[refseq_20GCF_5F000493695. 1_202013-10-31] 10,776 sequences; 2,431,687,698 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq2896 138 5e-31 seq4445 105 3e-21 >seq2896 Length=17782117 Score = 138 bits (152), Expect = 5e-31 Identities = 90/99 (91%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| Sbjct 9684247 GGAAAAGAAACTAACCAGGATTCCCTAAGTAACAGCGAGTGAACAGGGAAGAGCCCAGCG 9684188 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGC 99 | |||||| ||||| | |||||||||||| ||||||| Sbjct 9684187 CTAAATCCCTGCCCCATGCTGGGGCGCGGGAAATGTGGC 9684149 >seq4445 Length=13589194 Score = 105 bits (116), Expect = 3e-21 Identities = 86/102 (84%), Gaps = 2/102 (2%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| |||| ||||||||||| ||| | |||||| ||||||||||| | Sbjct 1884929 GGAAAAGAAACTAACAAGGAATCCCTCAGTAATGGCCA-TGAACAATGAAGAGCCCAGGG 1884871 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 || | |||| ||||| |||| ||||| |||| ||||||| || Sbjct 1884870 CCAAGTCCCAGCCCCACGGT-GGGCGTGGGAAATGTGGCATA 1884830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230376723840