Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03-
18] 421,444 sequences; 2,234,641,557 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq412768 134 2e-29
seq227835 102 1e-19
seq348283 84.2 3e-14
>seq412768
Length=38950
Score = 134 bits (148), Expect = 2e-29
Identities = 172/228 (75%), Gaps = 8/228 (4%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| || |||| || ||||| |||| | | |||||| |||||| |
Sbjct 38649 GTACAAAGGGCAGGGACTTAATCAATGCAAGCTTC-TGACCCACACTTACTGGGAATT-C 38592
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGA-TGAAATTTCAAAGATT 119
||| | | | || ||| ||||| | ||||||||||| | || ||| | | ||
Sbjct 38591 CTCACTCATGGGGAATAATGGCAATCCCCCATCCCCATCACAAATGGGATTCAATGGGTT 38532
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAG--ACTCGTTGAATACATCAGTGTAGCGCGCGTG 177
||||| ||||| | | || || ||| || || ||| || ||||||||||||||
Sbjct 38531 ACCCGCACCTGCCAGAGTAG-TG-TAGGCACACGCTGAGCCAGTCGGTGTAGCGCGCGTG 38474
Query 178 CGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225
| |||| | |||||||||||||||||||||||||||||| ||||| ||
Sbjct 38473 CAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 38427
>seq227835
Length=19624
Score = 102 bits (112), Expect = 1e-19
Identities = 166/232 (72%), Gaps = 8/232 (3%)
Strand=Plus/Minus
Query 5 AAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCG 64
||||||||||||| || ||| ||| | ||| ||||| || || ||| |||||||| | |
Sbjct 16742 AAAGGGCAGGGACTTAATCACCGCAAACTT-ATGACCTGCACTCACTGGGAATTTCTT-G 16685
Query 65 TTGAAGACCAACAATTGCAATGATCTATCCCCATCACGA-TGAAATTTCAAAGATTACCC 123
|| | | || ||||||||| |||||||||||| || || || | ||||
Sbjct 16684 TTCATGGGCAGTAATTGCAATCCCGGGTCCCCATCACGAATGGTGTTCCATGGGTTACTG 16625
Query 124 GGACCTGTCGGCCAAGGTGATAG--ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGC 181
| |||| ||| | || ||| || | ||| | ||||||| | |||||| ||
Sbjct 16624 GAGCCTGCTGGCATA--TGGTAGGCACACACTGAGCCCGCCAGTGTATCTTGCGTGCAGC 16567
Query 182 CCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
|| |||| |||||||||||||||||||||||||||| ||| || |||||
Sbjct 16566 CCCAAACAGCTAAGGGCATCACAGACCTGTTATTGCC-CAATCTCGGGTGGC 16516
>seq348283
Length=33069
Score = 84.2 bits (92), Expect = 3e-14
Identities = 82/103 (80%), Gaps = 2/103 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| || ||||| | ||||| ||||| || |||||| |||| |||
Sbjct 32584 GTACAAAGGGCAGGGACTTAATCAACACAAGCTT-ATGACCTGCACTTACTGGGAA-TTC 32527
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGA 103
||||| | | || ||||||||| | |||||||||||||
Sbjct 32526 CTCGTCCATGGGGAATAATTGCAATCCCCGATCCCCATCACGA 32484
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 748929780460
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |