Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03- 18] 421,444 sequences; 2,234,641,557 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq120093 138 5e-31 seq407139 100 1e-19 >seq120093 Length=602 Score = 138 bits (152), Expect = 5e-31 Identities = 90/99 (91%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| Sbjct 118 GGAAAAGAAACTAACCAGGATTCCCTAAGTAACAGCGAGTGAACAGGGAAGAGCCCAGCG 177 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGC 99 | |||||| ||||| | |||||||||||| ||||||| Sbjct 178 CTAAATCCCTGCCCCATGCTGGGGCGCGGGAAATGTGGC 216 >seq407139 Length=17244 Score = 100 bits (110), Expect = 1e-19 Identities = 85/102 (83%), Gaps = 2/102 (2%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||| ||||||| |||| ||||||||||| ||| | |||||| ||||||||||| | Sbjct 16877 GGAAAAGGAACTAACAAGGAATCCCTCAGTAATGGCCA-TGAACAATGAAGAGCCCAGGG 16935 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 || | |||| ||||| ||| |||||| |||| ||||||| || Sbjct 16936 CCAAGTCCCAGCCCCACGG-GGGGCGTGGGAAATGTGGCATA 16976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 229489680960