Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03-
18] 421,444 sequences; 2,234,641,557 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq412768 147 4e-33
seq227835 102 2e-19
seq348283 95.1 2e-17
seq121883 77.0 6e-12
seq349252 73.4 7e-11
>seq412768
Length=38950
Score = 147 bits (162), Expect = 4e-33
Identities = 194/266 (73%), Gaps = 11/266 (4%)
Strand=Plus/Plus
Query 68 CCGGCTTCTTAGAGGGACTATCGGC--TCA---AGCCGATGGAAGTTTGAGGCAATAACA 122
|| ||||||||||||||| | || ||| | |||| | ||||| ||||||||
Sbjct 38389 CCAGCTTCTTAGAGGGACGAGTGGTGTTCAGTTACCCGA-----GATTGAG-CAATAACA 38442
Query 123 GGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGA 182
|||||||||||||||||||||| | |||| ||||||||||||||| ||| | || ||
Sbjct 38443 GGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACCGACTGGCTCAGCGT 38502
Query 183 GTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATA 242
|| | | || | || |||| |||||| | | || | | | ||| |||||||
Sbjct 38503 GTGCCTACACTACTCTGGCAGGTGCGGGTAACCCATTGAATCCCATTTGTGATGGGGATG 38562
Query 243 GAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACG 302
| | ||||| |||||| | | | | ||||||| || |||||| | | |||| ||| |
Sbjct 38563 GGGGATTGCCATTATTCCCCATGAGTGAGGAATTCCCAGTAAGTGTGGGTCAGAAGCTTG 38622
Query 303 CGTTGATTACGTCCCTGCCCTTTGTA 328
| ||||||| ||||||||||||||||
Sbjct 38623 CATTGATTAAGTCCCTGCCCTTTGTA 38648
>seq227835
Length=19624
Score = 102 bits (112), Expect = 2e-19
Identities = 180/256 (70%), Gaps = 5/256 (2%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
||||||||| |||| | ||| | |||| || | ||| ||||||||||||||||||
Sbjct 16490 CTTCTTAGAAGGACAAATGGCATTCAGCCACCCGA-GATTG-GGCAATAACAGGTCTGTG 16547
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||| |||| |||| |||||| | ||||||| | | || | || | |
Sbjct 16548 ATGCCCTTAGCTGTTTGGGGCTGCACGCAAGATACACTGGCGGGCTCAGTGTGTGCCTAC 16607
Query 191 CCTTGGCCGGAAGG-TCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATT 249
| | ||| | ||| || | | | || | || | ||||| |||||| | |||
Sbjct 16608 CATATGCCAGCAGGCTCCAGTAACCCATGGAACAC-CATTCGTGATGGGGACCCGGGATT 16666
Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309
||||||| ||| | | ||| || ||| || ||| || || ||||| || ||| ||||
Sbjct 16667 GCAATTACTGCCCATGAACAAGAAATTCCCAGTGAGTGCAGGTCATAAGTTTGCGGTGAT 16726
Query 310 TACGTCCCTGCCCTTT 325
|| |||||||||||||
Sbjct 16727 TAAGTCCCTGCCCTTT 16742
>seq348283
Length=33069
Score = 95.1 bits (104), Expect = 2e-17
Identities = 81/100 (81%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 229 TCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGC 288
||||| ||||||| | | |||||||||||| | | | ||||||||| || |||||| ||
Sbjct 32484 TCGTGATGGGGATCGGGGATTGCAATTATTCCCCATGGACGAGGAATTCCCAGTAAGTGC 32543
Query 289 GTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
||||| ||| | |||||||| ||||||||||||||||
Sbjct 32544 AGGTCATAAGCTTGTGTTGATTAAGTCCCTGCCCTTTGTA 32583
>seq121883
Length=9577
Score = 77.0 bits (84), Expect = 6e-12
Identities = 80/101 (79%), Gaps = 3/101 (3%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | ||| | |||| || | ||||| ||||||||||||||||
Sbjct 1126 CTTCTTAGAGGGACAAGTGGCCTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 1069
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAC 171
|| |||||||||| | ||| ||||| ||||||||||||
Sbjct 1068 ATTACCTTAGATGTCCACGGCTACACGCACGCTACACTGAC 1028
>seq349252
Length=30673
Score = 73.4 bits (80), Expect = 7e-11
Identities = 46/50 (92%), Gaps = 0/50 (0%)
Strand=Plus/Minus
Query 122 AGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAC 171
||||||||||||||||||||||| | |||| ||| |||||||||||||||
Sbjct 2095 AGGTCTGTGATGCCCTTAGATGTCCGGGGCTGCATGCGCGCTACACTGAC 2046
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 943208082432
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |