Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03- 18] 421,444 sequences; 2,234,641,557 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq252726 450 4e-124 seq357599 379 7e-103 seq397443 302 1e-79 seq285571 197 4e-48 seq385546 156 1e-35 seq394420 116 1e-23 seq17627 113 1e-22 seq354846 109 2e-21 seq356497 105 2e-20 seq281235 84.2 7e-14 seq369307 80.6 9e-13 seq396838 75.2 4e-11 >seq252726 Length=7181 Score = 450 bits (498), Expect = 4e-124 Identities = 278/297 (94%), Gaps = 0/297 (0%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||||||||||||||| ||| ||||| || | ||||||||||||||||| Sbjct 6786 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACCGAGCCAGACTAGAGTCAAGCTCAG 6845 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||| |||||||||| ||||||||||||| |||| ||| ||||||||||||| | Sbjct 6846 CAGGGTCTTCCTTCCCCGCTGCTTCCGCCAAGCCCATTCCTTTGACTGTGGTTTCGCTGG 6905 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 6906 ATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATG 6965 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6966 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCA 7025 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 7026 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 7082 >seq357599 Length=3490 Score = 379 bits (420), Expect = 7e-103 Identities = 263/297 (89%), Gaps = 1/297 (0%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 ||||||||||||||||| ||||| || ||||| | | | ||||||||| ||||||| Sbjct 1414 CTCCCACTTATTCTACATTTCTCAT-TCTCTTCACCATGCCAGACTAGAGTTTAGCTCAA 1356 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||| || |||||||| ||||||| ||||||||||||||| ||||||| | Sbjct 1355 CAGGGTCTTCTTTCTCCTCTGATTCCACCAAGCCTGTTCCCTTGGCTGTGTTTTCGCTGG 1296 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| ||||||||||||||||||| || ||||||||||| || ||||||||||||| Sbjct 1295 ATAGTAGGTAGGGACAGTGGGAATCTCATTCATCCATTCATGTGCACCACTAATTAGATG 1236 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 |||||| |||||||||||| ||||||||| |||||||||||||| ||||||| |||| Sbjct 1235 ACGAGGTATTTGGCTACCTGAAGAGAGTCGTAGTTACTCCCGCCATTTACCCAAGCTTCA 1176 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1175 CTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 1119 Score = 89.7 bits (98), Expect = 2e-15 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| ||| || ||||||| |||| ||| ||||||||||||||| | ||| Sbjct 1719 CTTCTGCTCCACAAGAAGTTTCTGTCCTCCCTGAACTCCCCTTAGGACACCTACATTACC 1660 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 ||| |||| ||| || |||| | ||||||||||||||| || |||| Sbjct 1659 ATTTGACAGGTGTACCACCCCTGTCAAACTCCCCACCTGGCACTGTC 1613 >seq397443 Length=38993 Score = 302 bits (334), Expect = 1e-79 Identities = 246/297 (83%), Gaps = 5/297 (2%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 ||||||||||| |||||||| |||| |||||| | | ||||||||| |||||||| Sbjct 31828 CTCCCACTTAT---ACACCTCTTGAGTCTTTTCACTGTGCCAGACTAGAGTGAAGCTCAA 31884 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 | ||| || ||||||| ||||||| ||||| || || ||||||||||||||| ||| | Sbjct 31885 CGGGGACTCATTTCCCCACTGATTCTGCCAAACCTCTTTCCTTGGCTGTGGTTTTGCTGG 31944 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| ||||||||||||||||||| || |||||||||||| ||| ||||||||||| Sbjct 31945 ATAGTAGGTAGGGACAGTGGGAATCTCATTCATCCATTCATGCATGTCCCTAATTAGATG 32004 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 || | |||||||||||| || ||||||| |||||||| || || |||| | | |||| Sbjct 32005 ACAAAGCATTTGGCTACTTT--GAGAGTCTTAGTTACTTCCACCATTTATCAGAGCTTCA 32062 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||| ||||||||||||||||||||| | |||| || || ||||||||||| |||||| Sbjct 32063 TTGGATTTCTTCACTTTGACATTCACAACACTAGGTAGCAATCACATTGCATCAACA 32119 >seq285571 Length=6485 Score = 197 bits (218), Expect = 4e-48 Identities = 219/287 (76%), Gaps = 5/287 (2%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTC-GGACTAGAGTCAAGCTCA 295 |||||||||| ||| |||||| || ||||| | | | || || ||||| | ||| Sbjct 4245 CTCCCACTTAATCTTCACCTCCTGTCTCTCTTCACCATGCCAGGTTTACAGTCAGGTTCA 4304 Query 296 ACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTA 355 |||| |||||||| || | |||| ||||| || | || ||||||| ||||| | | Sbjct 4305 ACAG--TCTTCTTTGGCCACAGATTTTGCCAAACCA-TCCCTTTGGCTGCAGTTTCACCA 4361 Query 356 GATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 415 |||| ||| || || ||| |||| || || |||||||||||| || |||||||||| Sbjct 4362 GATAATAGGTAAAGAGAGTAGGAACATCATTCATCCATTCATGCATATCCCTAATTAGAT 4421 Query 416 GACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCC-GCCGTTTACCCGCGCTT 474 | ||||||||||||||||||||||||||||||||||| ||| | |||||| | || | Sbjct 4422 GGTGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACACCCATCAATTTACCTGAGCCT 4481 Query 475 GGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCAC 521 ||||||||| || |||| |||||| ||| ||||||| ||||||| Sbjct 4482 CACTGAATTTCTCCATTTTGCCATTCAAAGCCCTGGGCAAAAATCAC 4528 >seq385546 Length=26871 Score = 156 bits (172), Expect = 1e-35 Identities = 118/140 (84%), Gaps = 8/140 (6%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||||| |||||| ||||| | | |||||||||||||||||| Sbjct 26592 CTCCCACTTATTCT--------CAAGTCTCTTCACCGCGCCAGACTAGAGTCAAGCTCAA 26643 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||| |||||||||||| ||||||||||||||||| ||||||||||||| ||||| || | Sbjct 26644 CAGGATCTTCTTTCCCCTCTGATTCCGCCAAGCCCATTCCCTTGGCTGTTGTTTCACTGG 26703 Query 357 ATAGTAGATAGGGACAGTGG 376 ||||||||||||||||||| Sbjct 26704 GTAGTAGATAGGGACAGTGG 26723 Score = 75.2 bits (82), Expect = 4e-11 Identities = 75/96 (78%), Gaps = 5/96 (5%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||| | || || | ||||||| |||| |||| || ||||||||||||||| ||| Sbjct 26297 CTTCTGCCCCACGGGGG-TTTCTGTCCTCCCTGAGCCCGCCTTAGGACACCTGCATTACC 26355 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCAC 102 ||| |||| ||| ||||| ||||||||||||| Sbjct 26356 ATTTGACAGGTGTACCGCC----CCAAACTCCCCAC 26387 >seq394420 Length=12341 Score = 116 bits (128), Expect = 1e-23 Identities = 179/250 (72%), Gaps = 19/250 (8%) Strand=Plus/Plus Query 284 GAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTT--CCCTTGG 341 |||||| ||| |||| |||| || || | |||||| | ||| | | || ||||| | Sbjct 2622 GAGTCATGCTTAACATGGTCCTCCTTGTCAGCTGATCCTCTCAAACTCATTGCCCCTTAG 2681 Query 342 CTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGC 401 |||| |||| |||| | ||| || || ||| |||||||| | | ||| Sbjct 2682 CTGTTGTTTGACTAGGT--TAGTGAGA-ACCTTGG-----TCGTTAATTCGTACAT---- 2729 Query 402 GTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCG 461 | |||||||||||| ||||||||| ||||||||||||| |||| |||||| | ||| Sbjct 2730 --CTCTAATTAGATGATAAGGCATTTGACTACCTTAAGAGACTCATGGTTACT-CTGCCA 2786 Query 462 TTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCAC 521 |||| ||| ||||||||||| ||| ||||||| | |||||||||||||||| Sbjct 2787 TTTA--TTACCTTCATTGAATTTCTTTACTCTGACATTGGATGTACTGGGCAGAAATCAC 2844 Query 522 ATTGCGTCAA 531 || | |||| Sbjct 2845 ATCACATCAA 2854 >seq17627 Length=196 Score = 113 bits (124), Expect = 1e-22 Identities = 74/82 (90%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||||||||||||||| ||| ||||| | | |||||||||||||||||| Sbjct 115 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAA 174 Query 297 CAGGGTCTTCTTTCCCCGCTGA 318 |||||||||||||||||||||| Sbjct 175 CAGGGTCTTCTTTCCCCGCTGA 196 >seq354846 Length=31506 Score = 109 bits (120), Expect = 2e-21 Identities = 128/168 (76%), Gaps = 15/168 (9%) Strand=Plus/Minus Query 289 AAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGT 348 ||||||||| |||||| | || |||||||| ||||||| || ||||||| ||| | Sbjct 27433 AAGCTCAACCAGGTCTT---TGCCTGCTGATTCTGCCAAGCTAATTGCCTTGGCAGTG-T 27378 Query 349 TTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTA 408 ||| | |||| ||| ||||| ||||||| | || |||||| || |||||| Sbjct 27377 TTCCATGGATACTAGGTAGGGGCAGTGGGGGTT--GT------ATTCATAGGCATCACTA 27326 Query 409 ATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCC 456 ||| |||| |||||||||||||| |||| ||||||||||||||||| Sbjct 27325 CTTA-ATGATGAGGCATTTGGCTATCTTA--AGAGTCATAGTTACTCC 27281 >seq356497 Length=29299 Score = 105 bits (116), Expect = 2e-20 Identities = 69/76 (91%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 432 ACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACT 491 |||||||||||| |||||||||||| || ||||||| | |||| ||||||||||||||| Sbjct 26501 ACCTTAAGAGAGGCATAGTTACTCCTGCTGTTTACCTGTGCTTCCTTGAATTTCTTCACT 26560 Query 492 TTGACATTCAGAGCAC 507 |||||||||||||||| Sbjct 26561 TTGACATTCAGAGCAC 26576 >seq281235 Length=12343 Score = 84.2 bits (92), Expect = 7e-14 Identities = 72/89 (81%), Gaps = 5/89 (6%) Strand=Plus/Plus Query 46 CCTTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTG 105 ||||||||||||||||||| |||| | || ||| ||||||||| ||||||||||||||| Sbjct 7 CCTTAGGACACCTGCGTTACCGTTTGATAGGTGTACCGCCCCAGTCAAACTCCCCACCTG 66 Query 106 ACAATGTCATCAACCCGGATCGGCCCGCG 134 || |||| |||||| ||| |||| Sbjct 67 GCACTGTC-----CCCGGAGCGGGTCGCG 90 >seq369307 Length=8046 Score = 80.6 bits (88), Expect = 9e-13 Identities = 70/87 (80%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 308 TTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAG 367 |||| | || |||| ||||||| |||||||||||| ||||| | ||||||||| ||| Sbjct 3963 TTCCTTGATGCTTCCAGCAAGCCCAGTCCCTTGGCTGTAGTTTCTCCAGATAGTAGGTAG 4022 Query 368 GGACAGTGGGAATCTCGTTAATCCATT 394 ||| ||||| |||||| | ||||||| Sbjct 4023 GGAGAGTGGAAATCTCACTTATCCATT 4049 >seq396838 Length=40668 Score = 75.2 bits (82), Expect = 4e-11 Identities = 49/54 (91%), Gaps = 0/54 (0%) Strand=Plus/Minus Query 304 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 ||||||||| |||||||| |||||| || |||||||||||||||||||||| || Sbjct 13602 TTCTTTCCCTGCTGATTCTGCCAAGGCCTTTCCCTTGGCTGTGGTTTCGCTGGA 13549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1628308547712