Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bos_20indicus_20[refseq_20GCF_5F000247795.1_202014-11-25] 32 sequences; 2,673,965,444 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq6 185 4e-45 seq23 143 1e-32 >seq6 Length=122646612 Score = 185 bits (204), Expect = 4e-45 Identities = 102/102 (100%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 39106830 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 39106771 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 |||||||||||||||||||||||||||||||||||||||||| Sbjct 39106770 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 39106729 >seq23 Length=53331160 Score = 143 bits (158), Expect = 1e-32 Identities = 93/102 (91%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||| ||| ||||||||||||| | ||||||| Sbjct 7466729 GGAAAAGAAACTAACCAGGATTCCCTCAGTAAGGGCCAGTGAACAGGGAACAACCCAGCG 7466788 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 | ||||||| |||||||||||||| |||||||| ||||| || Sbjct 7466789 CGGAATCCCTGCCCCGCGGTGGGGWGCGGGACACGTGGCTTA 7466830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230399930880