Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bos_20indicus_20[refseq_20GCF_5F000247795.1_202014-11-25] 32 sequences; 2,673,965,444 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq21 473 4e-131 seq14 457 3e-126 seq4 432 1e-118 seq18 405 2e-110 seq3 316 7e-84 seq19 219 1e-54 seq2 217 5e-54 seq10 167 8e-39 seq22 156 1e-35 seq15 141 3e-31 seq11 120 1e-24 seq8 114 4e-23 seq13 102 3e-19 seq28 95.1 4e-17 seq1 78.8 3e-12 >seq21 Length=69307409 Score = 473 bits (524), Expect = 4e-131 Identities = 283/297 (95%), Gaps = 0/297 (0%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||||||||||||||| ||| ||||| | | |||||||||||||||||| Sbjct 52043357 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAA 52043416 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 52043417 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGG 52043476 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 52043477 ATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATG 52043536 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 52043537 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCA 52043596 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 52043597 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 52043653 Score = 441 bits (488), Expect = 2e-121 Identities = 276/297 (93%), Gaps = 0/297 (0%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||||||||||||||| ||| ||||| | | |||||||||||| ||||| Sbjct 54682046 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACTGTGCCAGACTAGAGTCAAACTCAA 54681987 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct 54681986 CAGGGTCTTCTTTCCCTGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGG 54681927 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| ||||||||||||||||||| || |||||||||||||| |||||||||||||| Sbjct 54681926 ATAGTAGGTAGGGACAGTGGGAATCTCCTTCATCCATTCATGCGCATCACTAATTAGATG 54681867 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| Sbjct 54681866 ACGAGGCATTTGGCTACCTTAAGAGAGTTATAGTTACTCCCGCCGTTTACCTGCGCTTCA 54681807 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 54681806 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGAGTCAACA 54681750 Score = 118 bits (130), Expect = 3e-24 Identities = 103/128 (80%), Gaps = 5/128 (4%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | ||||||||||||||||||| Sbjct 52043058 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACC 52043117 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||| |||| ||| ||||||||| ||||||||||||||| || |||| |||||| | Sbjct 52043118 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCACTGTC-----CCCGGAGC 52043172 Query 127 GGCCCGCG 134 || |||| Sbjct 52043173 GGGTCGCG 52043180 >seq14 Length=81409030 Score = 457 bits (506), Expect = 3e-126 Identities = 279/297 (94%), Gaps = 0/297 (0%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||||||||||||||| ||| ||||| | | |||||||||||||||||| Sbjct 16302420 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAA 16302361 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 16302360 CAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGG 16302301 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 16302300 ATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATG 16302241 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 16302240 AGGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCA 16302181 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||||||||||||||| | |||||||||||||| ||||||||| Sbjct 16302180 TTGAATTTCTTCACTTTGACATTCAGAGCAMTAGGCAGAAATCACATCGCGTCAACA 16302124 >seq4 Length=124429915 Score = 432 bits (478), Expect = 1e-118 Identities = 274/297 (92%), Gaps = 0/297 (0%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||| ||||||||||||||||| ||| ||||| | | |||||||||||||||||| Sbjct 55874874 CTCCCAGTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAA 55874815 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct 55874814 CAGGGTCTTCTTTCCCCGCTAATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGG 55874755 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| |||||||||| ||||||||||| |||||||||||||| |||||||||||||| Sbjct 55874754 ATAGTAGGTAGGGACAGTAGGAATCTCGTTCATCCATTCATGCGCATCACTAATTAGATG 55874695 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| Sbjct 55874694 ACGAGGCATTTGGCTACCTTAAGAGAGTCATATTTACTCCCGCCGTTTACCCGCACTTCA 55874635 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||| |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 55874634 TTGAATGTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCAGGTCAACA 55874578 Score = 288 bits (318), Expect = 3e-75 Identities = 244/297 (82%), Gaps = 3/297 (1%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||| ||||||||||||| || ||||| | | ||||| |||||||||||| Sbjct 87217418 CTCCCACTTACTCTACACCTCTCATATCTCTTCACTGTGCCAGACTAAAGTCAAGCTCAA 87217477 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 || ||||||||| ||| | |||||| |||| ||| |||||||||||||||||||| | | Sbjct 87217478 CAAGGTCTTCTTCCCCAGATGATTCTGCCAGGCCTGTTCCCTTGGCTGTGGTTTC-ATGG 87217536 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| |||||||| |||||||| ||| ||||||||||| || ||| |||||| ||| Sbjct 87217537 ATAGTAGGTAGGGACAATGGGAATC-GGTTCATCCATTCATGTGCATCAGTAATTATATG 87217595 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 | || || ||| | | |||||||||||||| ||||||||| || ||||| || ||| Sbjct 87217596 ATGAAGC-TTTAGTTCTCTTAAGAGAGTCATCGTTACTCCCACCACTTACCTGCCCTTCA 87217654 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||| |||| ||| ||||||||||||||||| ||||||||| ||| ||||||| Sbjct 87217655 TTGAATKTCTTTACTATGACATTCAGAGCACTGAGCAGAAATCGCATCAGGTCAACA 87217711 >seq18 Length=65948792 Score = 405 bits (448), Expect = 2e-110 Identities = 244/257 (95%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||||||||||||||| ||| ||||| | | |||||||||||||||||| Sbjct 59931495 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAA 59931436 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 59931435 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGG 59931376 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 59931375 ATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATG 59931316 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 59931315 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCA 59931256 Query 477 TTGAATTTCTTCACTTT 493 ||||||||||||||||| Sbjct 59931255 TTGAATTTCTTCACTTT 59931239 Score = 118 bits (130), Expect = 3e-24 Identities = 103/128 (80%), Gaps = 5/128 (4%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | ||||||||||||||||||| Sbjct 59931794 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACC 59931735 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||| |||| ||| ||||||||| ||||||||||||||| || |||| |||||| | Sbjct 59931734 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCACTGTC-----CCCGGAGC 59931680 Query 127 GGCCCGCG 134 || |||| Sbjct 59931679 GGGTCGCG 59931672 >seq3 Length=127865068 Score = 316 bits (350), Expect = 7e-84 Identities = 252/302 (83%), Gaps = 5/302 (2%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||| |||||| |||||||| ||| ||| | ||| | | |||||||||||| ||| Sbjct 100740990 CTCCTACTTATGCTACACCTGTCATGTCTCTGCACCTGGCCCCACTAGAGTCAAGTTCAG 100741049 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 ||||||||| | |||||||||||| |||||| || |||||||||||||||||||| | | Sbjct 100741050 TAGGGTCTTCATACCCCGCTGATTCTGCCAAGYCCATTCCCTTGGCTGTGGTTTCGATGG 100741109 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| ||| ||||||| ||||||| || ||||||||||| | ||||||||||||||| Sbjct 100741110 ATAGTAGGTAGAGACAGTGAGAATCTCTTTCATCCATTCATGTGAGTCACTAATTAGATG 100741169 Query 417 ACGAGGCA-TTTGGCTACCTTAAGAGAGTCA----TAGTTACTCCCGCCGTTTACCCGCG 471 || ||||| |||||||| ||||||||||| | ||| ||||| ||| |||||| | | Sbjct 100741170 ACAAGGCATTTTGGCTATCTTAAGAGAGTAAATGGCAGTCACTCCTGCCATTTACCGGTG 100741229 Query 472 CTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAA 531 ||| ||||||||||||| |||||||||||||||||||||||||||| |||| | ||||| Sbjct 100741230 CTTCATTGAATTTCTTCAGTTTGACATTCAGAGCACTGGGCAGAAATGACATCGTGTCAA 100741289 Query 532 CA 533 || Sbjct 100741290 CA 100741291 >seq19 Length=65317831 Score = 219 bits (242), Expect = 1e-54 Identities = 168/199 (84%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 306 CTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 365 |||||||| |||||||| |||||| ||||||||||||||| ||||||| |||||| | Sbjct 20969395 CTTTCCCCACTGATTCCACCAAGCTTGTTCCCTTGGCTGTGATTTCGCTGCGTAGTAGGT 20969336 Query 366 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 425 |||| |||| | ||||| || |||||| ||||| | ||||||||||||||| ||||||| Sbjct 20969335 AGGGGCAGTAAGGATCTCATTCATCCATACATGCACATCACTAATTAGATGATGAGGCAT 20969276 Query 426 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC 485 ||||| || |||||||||| |||| |||||| || |||| | ||| || ||||||||| Sbjct 20969275 GTGGCTTCCCTAAGAGAGTCTTAGTGACTCCCACCATTTATCTGCGTTTCATTGAATTTC 20969216 Query 486 TTCACTTTGACATTCAGAG 504 ||||||||||||||||||| Sbjct 20969215 TTCACTTTGACATTCAGAG 20969197 >seq2 Length=140680885 Score = 217 bits (240), Expect = 5e-54 Identities = 172/206 (83%), Gaps = 3/206 (1%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 ||||||||||||||||| ||||| ||| ||||| | | | ||||| |||||||||||| Sbjct 90390829 CTCCCACTTATTCTACATGTCTCAGGTCTCTTCACCATGCCAGACTACAGTCAAGCTCAA 90390888 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 ||||||||||||||| |||||||| | || || ||||||||||||||| ||| ||| | Sbjct 90390889 TAGGGTCTTCTTTCCCTGCTGATTCTGTCATACCTGTTCCCTTGGCTGTGCTTTTGCTGG 90390948 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||| ||| |||||||| ||||| |||| ||||||||||| |||||||| |||||| Sbjct 90390949 ATAATAGGTAGGGACAATGGGAGTCTC---CATCCATTCATGGATGTCACTAACTAGATG 90391005 Query 417 ACGAGGCATTTGGCTACCTTAAGAGA 442 | ||||||| |||||||||||||||| Sbjct 90391006 ATGAGGCATCTGGCTACCTTAAGAGA 90391031 >seq10 Length=106310653 Score = 167 bits (184), Expect = 8e-39 Identities = 124/146 (85%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 ||||||||||| ||| |||||||| || ||||| | ||||||| ||| ||||| Sbjct 77979633 CTCCCACTTATCCTAYACCTCTCATTTCTCTTCACCGTGCTAGACTAGAATCAGTCTCAA 77979692 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||| |||| |||| |||||||| ||||||||||||||||||||||||||||| || | Sbjct 77979693 CAGGGTTTTCTCTCCCTGCTGATTCGGCCAAGCCCGTTCCCTTGGCTGTGGTTTCACTGG 77979752 Query 357 ATAGTAGATAGGGACAGTGGGAATCT 382 ||||||| |||||||||||||||||| Sbjct 77979753 ATAGTAGGTAGGGACAGTGGGAATCT 77979778 Score = 113 bits (124), Expect = 1e-22 Identities = 89/107 (83%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| || | |||| | ||||||||||||||||||| Sbjct 79642716 CTTCTGCTCCACGGGAGGTTTCTGTCCTTCCTGAGCTCACCTTAGGACACCTGCGTTACC 79642775 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 |||| |||| ||| ||||||||| ||||||||||||||| || |||| Sbjct 79642776 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCACTGTC 79642822 >seq22 Length=61892534 Score = 156 bits (172), Expect = 1e-35 Identities = 122/144 (85%), Gaps = 7/144 (5%) Strand=Plus/Minus Query 356 GATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 415 || ||||| ||||||||||||||||||| || || |||||| || ||||| ||| ||| Sbjct 30894773 GACAGTAGGTAGGGACAGTGGGAATCTCATTCATTCATTCAYGCACGTCATTAA---GAT 30894717 Query 416 GACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTG 475 || ||||||||||| |||||||||||| |||||||||||||| |||||||| | ||| Sbjct 30894716 GATGAGGCATTTGGATACCTTAAGAGATTCATAGTTACTCCCACCGTTTAC---CACTT- 30894661 Query 476 GTTGAATTTCTTCACTTTGACATT 499 |||||||||||||||||||||| Sbjct 30894660 CATGAATTTCTTCACTTTGACATT 30894637 >seq15 Length=84800079 Score = 141 bits (156), Expect = 3e-31 Identities = 90/98 (92%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 352 GCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATT 411 ||| ||||||||| |||||||||||||||||| | |||||||||||| | ||||||||| Sbjct 4847837 GCTGGATAGTAGAAAGGGACAGTGGGAATCTCACTCATCCATTCATGCACATCACTAATT 4847896 Query 412 AGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAG 449 |||||| ||||||||||||||||||||||||||||||| Sbjct 4847897 AGATGAGGAGGCATTTGGCTACCTTAAGAGAGTCATAG 4847934 >seq11 Length=110256634 Score = 120 bits (132), Expect = 1e-24 Identities = 99/121 (82%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 406 CTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTA 465 ||||||||||||| ||||||||||||||||| ||||| | |||||||| | | |||| Sbjct 63446694 CTAATTAGATGACAAGGCATTTGGCTACCTTGAGAGATTGTTAGTTACTTTCATCATTTA 63446635 Query 466 CCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTG 525 || | ||| ||| ||||||| |||||||||||||| |||| ||||||||||| | || Sbjct 63446634 CCAGAACTTCATTGTATTTCTTTTCTTTGACATTCAGAACACTAGGCAGAAATCATACTG 63446575 Query 526 C 526 | Sbjct 63446574 C 63446574 Score = 91.5 bits (100), Expect = 5e-16 Identities = 113/152 (74%), Gaps = 7/152 (5%) Strand=Plus/Minus Query 372 AGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCT 431 |||| ||||| | | || |||||| | ||| || |||||||||||| ||||| | Sbjct 46447071 AGTGAAAATCTTGGTCATGAATTCATACATGTCTCTGATTAGATGACGAAGCATTGG--- 46447015 Query 432 ACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACT 491 ||||||||| |||||||||||| ||| |||| ||| |||||||| |||||| Sbjct 46447014 --CTTAAGAGAATCATAGTTACTCT-GCCATTTATTTAA-CTTCATTGAATTTTTTCACT 46446959 Query 492 TTGACATTCAGAGCACTGGGCAGAAATCACAT 523 ||||||| | | |||||||||||| || || Sbjct 46446958 CTGACATTGAATGTACTGGGCAGAAACCATAT 46446927 >seq8 Length=116941312 Score = 114 bits (126), Expect = 4e-23 Identities = 102/128 (80%), Gaps = 5/128 (4%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | |||||||||||||| |||| Sbjct 32735003 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGTGTTACC 32734944 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||| |||| ||| ||||||||| ||||||||||||||| || |||| |||||| | Sbjct 32734943 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCACTGTC-----CCCGGAGC 32734889 Query 127 GGCCCGCG 134 || |||| Sbjct 32734888 GGGTCGCG 32734881 Score = 96.9 bits (106), Expect = 1e-17 Identities = 76/89 (85%), Gaps = 2/89 (2%) Strand=Plus/Plus Query 374 TGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTAC 433 |||||| ||| || ||||||||||| | |||||||| |||||| ||| |||||| ||| Sbjct 14404372 TGGGAAGCTC-TTCATCCATTCATGTRCA-CACTAATTGGATGACCAGGAATTTGGGTAC 14404429 Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGT 462 ||||| ||||||||||||||||| ||||| Sbjct 14404430 CTTAAAAGAGTCATAGTTACTCCTGCCGT 14404458 Score = 84.2 bits (92), Expect = 7e-14 Identities = 83/107 (78%), Gaps = 4/107 (4%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| | |||| ||||||| |||| ||| | | ||||||||||||||||| Sbjct 37867883 CTTCTGCTCCATGGGAGGTTTCTGTCCTCCCCGAGCTCGCTTTAGGACACCTGCGTTACC 37867942 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 |||| |||| ||| ||||| |||||||||||| ||| || |||| Sbjct 37867943 GTTTGACAGGTGTACCGCC----CCAAACTCCCCAGCTGGCACTGTC 37867985 >seq13 Length=84433108 Score = 102 bits (112), Expect = 3e-19 Identities = 86/106 (81%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||| | ||||||| ||||||| |||| | || | ||| |||||||||| |||| Sbjct 72861225 CTTCTGCCCCACAGGAGGTTTCTGTCCTCCCTAAGCTCGCCTCAGGACACCTGTGTTACT 72861284 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGT 112 |||| |||| ||| ||||||||| ||||||||||||||| || ||| Sbjct 72861285 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCACTGT 72861330 >seq28 Length=46105673 Score = 95.1 bits (104), Expect = 4e-17 Identities = 118/159 (74%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 285 AGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTG 344 ||||| | |||| || |||||||| || | |||| ||||| || ||| |||||||| Sbjct 14065574 AGTCAGGTTCAA-AGAGTCTTCTTCATCCACAGATTTTGCCAAACCA-TTCTCTTGGCTG 14065631 Query 345 TGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTC 404 | ||||| | | ||| | || ||| ||||| || || ||||||||||| ||| Sbjct 14065632 TAGTTTCATCAACAAATAGGTGAAGAGAGTAGGAATATCATTCTTCCATTCATGCATGTC 14065691 Query 405 ACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAG 443 ||||||| ||| |||| ||||||||||||||| |||| Sbjct 14065692 CCTAATTATATGGTGAGGAATTTGGCTACCTTAAAAGAG 14065730 Score = 77.0 bits (84), Expect = 1e-11 Identities = 71/87 (82%), Gaps = 3/87 (3%) Strand=Plus/Plus Query 437 AAGAGAGTCATAGTTACTCCCGCCG-TTTACCCGCG-CTTGGTTGAATTTCTTCACTTTG 494 ||||||| ||||| || ||| | |||||| ||| || ||| |||||||||||||| | Sbjct 14065944 AAGAGAGCCATAGCTATACCCATCAATTTACCTGCGACTYGGT-GAATTTCTTCACTTCG 14066002 Query 495 ACATTCAGAGCACTGGGCAGAAATCAC 521 ||||||| || |||||||| ||||||| Sbjct 14066003 ACATTCAAAGTACTGGGCAAAAATCAC 14066029 >seq1 Length=161108492 Score = 78.8 bits (86), Expect = 3e-12 Identities = 82/107 (77%), Gaps = 5/107 (5%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| | |||| ||||||| |||| ||| | ||||||||||||||||||| Sbjct 124755800 CTTCTGCTCCATGGGAGCTTTCTGTYCTCCCAGAGCTCACCTTAGGACACCTGCGTTA-C 124755742 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 ||| |||| | | || || |||||||||||||||| || |||| Sbjct 124755741 CTTTGACAGGTATACCACC----CCAAACTCCCCACCTGCCACTGTC 124755699 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635199476736