Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bos_20indicus_20[refseq_20GCF_5F000247795.1_202014-11-25] 32 sequences; 2,673,965,444 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq28 87.8 7e-12 >seq28 Length=46105673 Score = 87.8 bits (96), Expect = 7e-12 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 349072 GGCGTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCC 349131 ||||| || ||||| |||| | ||||| ||| ||||| | |||| ||| || ||||| Sbjct 33144205 GGCGTTGATGATCTCTTTGATGCGGGGCACGCCYAGGGTGATGTTCATGGAGGCCACGCC 33144264 Query 349132 GGCAAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGG 349186 ||||||||||| |||| ||||||| ||| ||| ||||| || |||| |||| Sbjct 33144265 CGCAAAGTGGAAAGTCTTCAGGGTCATCTGGGTGCCCGGCTCACCAATGCTCTGG 33144319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084738324409536