Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bos_20mutus_20[refseq_20GCF_5F000298355.1_202013-01-09] 41,192 sequences; 2,645,161,911 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq34533 91.5 6e-13 >seq34533 Length=547 Score = 91.5 bits (100), Expect = 6e-13 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 349072 GGCGTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCC 349131 ||||| || ||||| |||| | ||||| ||||||||| | |||| ||| || ||||| Sbjct 163 GGCGTTGATGATCTCTTTGATGCGGGGCACGCCCAGGGTGATGTTCATGGAGGCCACGCC 222 Query 349132 GGCAAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGG 349186 ||||||||||| |||| ||||||| ||| ||| ||||| || |||| |||| Sbjct 223 CGCAAAGTGGAAAGTCTTCAGGGTCATCTGGGTGCCTGGCTCACCAATGCTCTGG 277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2083612096175216