Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bos_20taurus_20[refseq_20GCF_5F000003055.6_202014-11-25] 3,144 sequences; 2,670,139,648 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq26 170 4e-40 >seq26 Length=51681464 Score = 170 bits (188), Expect = 4e-40 Identities = 119/133 (89%), Gaps = 2/133 (2%) Strand=Plus/Plus Query 2 TTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCA 61 ||||||| |||||| ||||| | | |||||||||| |||||||||||||||||||||| Sbjct 4831898 TTTACAACCCGAAGGCCTTCATCCTG-CACGCGGCAT-GGCTGGATCAGGCTTTCGCCCA 4831955 Query 62 TTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 121 |||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct 4831956 TTGTCCAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGT 4832015 Query 122 GTGACTGATCATC 134 ||| ||| || || Sbjct 4832016 GTGGCTGGTCGTC 4832028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071966296320