Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bos_20taurus_20[refseq_20GCF_5F000003055.6_202014-11-25] 3,144 sequences; 2,670,139,648 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq3059 91.5 9e-17 seq25 91.5 9e-17 seq2 91.5 9e-17 seq3065 77.0 2e-12 seq3 77.0 2e-12 >seq3059 Length=901 Score = 91.5 bits (100), Expect = 9e-17 Identities = 68/76 (89%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 128 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 185 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 186 TAAT-CAACGCAAGCT 200 >seq25 Length=42904170 Score = 91.5 bits (100), Expect = 9e-17 Identities = 68/76 (89%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 32420701 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 32420644 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 32420643 TAAT-CAACGCAAGCT 32420629 Score = 91.5 bits (100), Expect = 9e-17 Identities = 68/76 (89%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 32421787 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 32421730 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 32421729 TAAT-CAACGCAAGCT 32421715 Score = 91.5 bits (100), Expect = 9e-17 Identities = 68/76 (89%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 32423851 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 32423794 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 32423793 TAAT-CAACGCAAGCT 32423779 Score = 91.5 bits (100), Expect = 9e-17 Identities = 68/76 (89%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 32427071 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 32427014 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 32427013 TAAT-CAACGCAAGCT 32426999 Score = 91.5 bits (100), Expect = 9e-17 Identities = 68/76 (89%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 32429968 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 32429911 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 32429910 TAAT-CAACGCAAGCT 32429896 Score = 91.5 bits (100), Expect = 9e-17 Identities = 68/76 (89%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 32434927 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 32434870 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 32434869 TAAT-CAACGCAAGCT 32434855 Score = 91.5 bits (100), Expect = 9e-17 Identities = 68/76 (89%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 32438681 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 32438624 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 32438623 TAAT-CAACGCAAGCT 32438609 Score = 91.5 bits (100), Expect = 9e-17 Identities = 68/76 (89%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 32442498 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 32442441 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 32442440 TAAT-CAACGCAAGCT 32442426 Score = 91.5 bits (100), Expect = 9e-17 Identities = 68/76 (89%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 32446115 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 32446058 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 32446057 TAAT-CAACGCAAGCT 32446043 Score = 91.5 bits (100), Expect = 9e-17 Identities = 68/76 (89%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 32447161 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 32447104 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 32447103 TAAT-CAACGCAAGCT 32447089 Score = 91.5 bits (100), Expect = 9e-17 Identities = 68/76 (89%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 32448026 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 32447969 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 32447968 TAAT-CAACGCAAGCT 32447954 Score = 91.5 bits (100), Expect = 9e-17 Identities = 68/76 (89%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 32448999 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 32448942 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 32448941 TAAT-CAACGCAAGCT 32448927 Score = 91.5 bits (100), Expect = 9e-17 Identities = 68/76 (89%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 32450747 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 32450690 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 32450689 TAAT-CAACGCAAGCT 32450675 Score = 91.5 bits (100), Expect = 9e-17 Identities = 68/76 (89%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 32451643 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 32451586 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 32451585 TAAT-CAACGCAAGCT 32451571 Score = 91.5 bits (100), Expect = 9e-17 Identities = 68/76 (89%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 32452613 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 32452556 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 32452555 TAAT-CAACGCAAGCT 32452541 Score = 91.5 bits (100), Expect = 9e-17 Identities = 68/76 (89%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 32454026 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 32453969 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 32453968 TAAT-CAACGCAAGCT 32453954 Score = 91.5 bits (100), Expect = 9e-17 Identities = 68/76 (89%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 32454872 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 32454815 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 32454814 TAAT-CAACGCAAGCT 32454800 Score = 91.5 bits (100), Expect = 9e-17 Identities = 68/76 (89%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 32456012 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 32455955 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 32455954 TAAT-CAACGCAAGCT 32455940 Score = 91.5 bits (100), Expect = 9e-17 Identities = 68/76 (89%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 32457049 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 32456992 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 32456991 TAAT-CAACGCAAGCT 32456977 Score = 91.5 bits (100), Expect = 9e-17 Identities = 68/76 (89%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||||| ||||||||||||||||| Sbjct 32458138 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGGGAGTACAAAGGGCAGGGACT 32458081 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 32458080 TAAT-CAACGCAAGCT 32458066 Score = 91.5 bits (100), Expect = 9e-17 Identities = 68/76 (89%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 32459282 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACC 32459225 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 32459224 TAAT-CAACGCAAGCT 32459210 Score = 91.5 bits (100), Expect = 9e-17 Identities = 68/76 (89%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 32460124 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 32460067 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 32460066 TAAT-CAACGCAAGCT 32460052 Score = 91.5 bits (100), Expect = 9e-17 Identities = 68/76 (89%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 32461143 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 32461086 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 32461085 TAAT-CAACGCAAGCT 32461071 Score = 91.5 bits (100), Expect = 9e-17 Identities = 68/76 (89%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 32462741 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 32462684 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 32462683 TAAT-CAACGCAAGCT 32462669 Score = 91.5 bits (100), Expect = 9e-17 Identities = 68/76 (89%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 32464305 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 32464248 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 32464247 TAAT-CAACGCAAGCT 32464233 Score = 86.0 bits (94), Expect = 4e-15 Identities = 67/76 (88%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| ||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 32439787 CTCACTAAAACATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 32439730 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 32439729 TAAT-CAACGCAAGCT 32439715 Score = 86.0 bits (94), Expect = 4e-15 Identities = 67/76 (88%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||| ||| |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 32444189 CTCATTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 32444132 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 32444131 TAAT-CAACGCAAGCT 32444117 Score = 86.0 bits (94), Expect = 4e-15 Identities = 67/76 (88%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| |||||||||||| |||||| Sbjct 32461831 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGTAGGGACT 32461774 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 32461773 TAAT-CAACGCAAGCT 32461759 Score = 80.6 bits (88), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 3/75 (4%) Strand=Plus/Minus Query 50 TCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGT 109 ||||||| |||| || ||||||||| ||||||||||| || ||||||||||||||| | Sbjct 32432087 TCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTCGACAAAGGGCAGGGACTT 32432030 Query 110 AATACAACGCAAGCT 124 ||| ||||||||||| Sbjct 32432029 AAT-CAACGCAAGCT 32432016 Score = 80.6 bits (88), Expect = 2e-13 Identities = 67/77 (87%), Gaps = 4/77 (5%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGAC-GGGCGGGGTGTACAAAGGGCAGGGAC 107 |||||||| |||| || ||||||||| ||||| |||||| |||||||||||||||| || Sbjct 32449926 CTCACTAAACCATC-CAATCGGTAGTA-GCGACCGGGCGGTGTGTACAAAGGGCAGGTAC 32449869 Query 108 GTAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 32449868 TTAAT-CAACGCAAGCT 32449853 Score = 78.8 bits (86), Expect = 6e-13 Identities = 55/60 (92%), Gaps = 2/60 (3%) Strand=Plus/Minus Query 64 CATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGC 123 || ||||||||| ||||||||||| ||||||||||||||||||| |||| |||||||||| Sbjct 32445249 CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACTTAAT-CAACGCAAGC 32445192 Score = 78.8 bits (86), Expect = 6e-13 Identities = 64/74 (86%), Gaps = 3/74 (4%) Strand=Plus/Minus Query 51 CACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTA 110 || |||||||| || |||| | || ||||||||||| ||||||||||||||||||| || Sbjct 32463831 CATTAAGCCATC-CAATCGGGAATA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACTTA 32463774 Query 111 ATACAACGCAAGCT 124 || ||||||||||| Sbjct 32463773 AT-CAACGCAAGCT 32463761 Score = 77.0 bits (84), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||| ||| |||| || ||||||||| ||||||||||| |||||| | |||||||||| Sbjct 32425003 CTCAGTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACCATGGGCAGGGACT 32424946 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 32424945 TAAT-CAACGCAAGCT 32424931 >seq2 Length=137060424 Score = 91.5 bits (100), Expect = 9e-17 Identities = 68/76 (89%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 66607406 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 66607349 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 66607348 TAAT-CAACGCAAGCT 66607334 Score = 91.5 bits (100), Expect = 9e-17 Identities = 68/76 (89%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 66608397 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 66608340 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 66608339 TAAT-CAACGCAAGCT 66608325 Score = 86.0 bits (94), Expect = 4e-15 Identities = 67/76 (88%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| |||||||||||||| |||| Sbjct 66608707 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAAGGACT 66608650 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 66608649 TAAT-CAACGCAAGCT 66608635 >seq3065 Length=583 Score = 77.0 bits (84), Expect = 2e-12 Identities = 64/76 (84%), Gaps = 2/76 (3%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || || || |||||||||||| ||||||||||||||||||| Sbjct 493 CTCACTAAACCATC-CAATCTGTCTCTAGCGACGGGCGGTGTGTACAAAGGGCAGGGACT 435 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 434 TAAT-CAACGCAAGCT 420 >seq3 Length=121430405 Score = 77.0 bits (84), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| |||| |||||| || |||||||||||||||| Sbjct 10806474 CTCACTAAACCATC-CAATCGGTAGTA-GCGATGGGCGGTGTATACAAAGGGCAGGGACT 10806531 Query 109 TAATACAACGCAAGCT 124 |||| |||| |||||| Sbjct 10806532 TAAT-CAACACAAGCT 10806546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300791133920