Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bubalus_20bubalis_20[refseq_20GCF_5F000471725.1_202013-09-30]
366,983 sequences; 2,836,166,969 total letters
Query= AAMG01000140.1
Length=336
Score E
Sequences producing significant alignments: (Bits) Value
seq236526 291 2e-76
>seq236526
Length=526
Score = 291 bits (322), Expect = 2e-76
Identities = 251/308 (81%), Gaps = 2/308 (1%)
Strand=Plus/Plus
Query 6 CGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTG 65
||| ||| || |||||||||| |||||| || |||| |||||||| |||||||| |
Sbjct 221 CGAACAGCGGAGTGAAATAGAACCTGAAACCATGCGCTTACAAGCGATCGGAGCCCTTTA 280
Query 66 ATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGT 125
| |||||||| ||||||||||||||||||||||||||||||||| | || || ||||
Sbjct 281 GTGGGGTGACGGTGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCTTTACTGGCAAGGT 340
Query 126 TAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGT 185
||||||||| ||| |||||| |||||| ||||||||| | | | |||||| ||| ||
Sbjct 341 TAAGGGCTTAAGGTCCGTTAACCGAAGCGAAAGCGAGTC-TGATAGGGCGCATAGTCAGT 399
Query 186 GGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGT 245
| ||||||||||||||||||||||||||||| | |||||||||| || ||||| ||
Sbjct 400 AGAGCTAGACGCGAAACCTTGTGATCTACCCATGGTCAGGTTGAAGGTGCCGTAACAGGT 459
Query 246 GATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGA 305
||||||||||||||| ||| |||||||||| || ||||||| | ||||| ||||||
Sbjct 460 ACTGGAGGACCGAACCGATAAGCGTTGAAAAGCTTCCGGATGAACTGTGGGTA-GGGTGA 518
Query 306 AAGGCCAA 313
||||| ||
Sbjct 519 AAGGCTAA 526
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 969229989376
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |