Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bubalus_20bubalis_20[refseq_20GCF_5F000471725.1_202013-09-30]
366,983 sequences; 2,836,166,969 total letters
Query= AAMG01001213.1
Length=600
Score E
Sequences producing significant alignments: (Bits) Value
seq236526 219 2e-54
>seq236526
Length=526
Score = 219 bits (242), Expect = 2e-54
Identities = 298/408 (73%), Gaps = 21/408 (5%)
Strand=Plus/Minus
Query 185 TTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAAC-CTAAGTGGGTTCGG 243
|| ||||||||||| || |||||| |||||| |||||||| || | | |||||||
Sbjct 526 TTAGCCTTTCACCC-TACCCACAGTTCATCCGGAAGCTTTTCAACGCTTA-TCGGTTCGG 469
Query 244 TCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGG 303
||||||| | |||| |||||||||| |||||| |||||||| | |||| |
Sbjct 468 TCCTCCAGTACCTGTTACGGCACCTTCAACCTGACCATGGGTAGATCACAAGGTTTCGCG 409
Query 304 TCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCAC-- 361
||| | || ||| || |||||||| | |||||||||||||| ||| || | ||
Sbjct 408 TCTAGCTCTACTGACT-ATGCGCCCTAT-CAGACTCGCTTTCGCTTCGGTTAACGGACCT 351
Query 362 --ACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCC 419
| ||||||| || | || | |||||| ||||||||| | |||||||||| ||
Sbjct 350 TAAGCCCTTAACCTTGCCAGTAAAGACTAACTCGTAGGCTCATTATGCAAAAGGCACACC 291
Query 420 GTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGT 479
|||||| ||||| ||| ||||| | ||||| || |||||||||||||
Sbjct 290 GTCACCCCA---CTAAAGGGC--------TCCGATCGCTTGTAAGCGCATGGTTTCAGGT 242
Query 480 ACTATTTCACTCCCC-GCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTA 538
|||||||||||| | | | ||| |||||||||||||| |||| ||||| || | |||
Sbjct 241 TCTATTTCACTCCGCTGTTCGCGGTTCTTTTCACCTTTCCTTCACAGTACTAGTTCACTA 182
Query 539 TCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTC 586
|||||| | |||||||||||| |||| ||| |||| ||| || ||||
Sbjct 181 TCGGTCTCTCAGGAGTATTTAGCCTTACCGGATGGTGCCGGCAAATTC 134
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1810929716992
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |