Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bubalus_20bubalis_20[refseq_20GCF_5F000471725.1_202013-09-30] 366,983 sequences; 2,836,166,969 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq236526 219 2e-54 >seq236526 Length=526 Score = 219 bits (242), Expect = 2e-54 Identities = 298/408 (73%), Gaps = 21/408 (5%) Strand=Plus/Minus Query 185 TTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAAC-CTAAGTGGGTTCGG 243 || ||||||||||| || |||||| |||||| |||||||| || | | ||||||| Sbjct 526 TTAGCCTTTCACCC-TACCCACAGTTCATCCGGAAGCTTTTCAACGCTTA-TCGGTTCGG 469 Query 244 TCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGG 303 ||||||| | |||| |||||||||| |||||| |||||||| | |||| | Sbjct 468 TCCTCCAGTACCTGTTACGGCACCTTCAACCTGACCATGGGTAGATCACAAGGTTTCGCG 409 Query 304 TCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCAC-- 361 ||| | || ||| || |||||||| | |||||||||||||| ||| || | || Sbjct 408 TCTAGCTCTACTGACT-ATGCGCCCTAT-CAGACTCGCTTTCGCTTCGGTTAACGGACCT 351 Query 362 --ACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCC 419 | ||||||| || | || | |||||| ||||||||| | |||||||||| || Sbjct 350 TAAGCCCTTAACCTTGCCAGTAAAGACTAACTCGTAGGCTCATTATGCAAAAGGCACACC 291 Query 420 GTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGT 479 |||||| ||||| ||| ||||| | ||||| || ||||||||||||| Sbjct 290 GTCACCCCA---CTAAAGGGC--------TCCGATCGCTTGTAAGCGCATGGTTTCAGGT 242 Query 480 ACTATTTCACTCCCC-GCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTA 538 |||||||||||| | | | ||| |||||||||||||| |||| ||||| || | ||| Sbjct 241 TCTATTTCACTCCGCTGTTCGCGGTTCTTTTCACCTTTCCTTCACAGTACTAGTTCACTA 182 Query 539 TCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTC 586 |||||| | |||||||||||| |||| ||| |||| ||| || |||| Sbjct 181 TCGGTCTCTCAGGAGTATTTAGCCTTACCGGATGGTGCCGGCAAATTC 134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1810929716992