Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bubalus_20bubalis_20[refseq_20GCF_5F000471725.1_202013-09-30]
366,983 sequences; 2,836,166,969 total letters
Query= AAMG01001291.1
Length=420
Score E
Sequences producing significant alignments: (Bits) Value
seq236526 232 2e-58
>seq236526
Length=526
Score = 232 bits (256), Expect = 2e-58
Identities = 292/387 (75%), Gaps = 17/387 (4%)
Strand=Plus/Minus
Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68
|||||| |||| | | || ||||||||| | |||||||||||||||||| | |||
Sbjct 509 CCACAGTTCATCCGG--AAGCTTTTCAACGCTTATCGGTTCGGTCCTCCAGTACCT-GTT 453
Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128
|| ||||| ||||||| |||| || |||||| | ||||| || ||||| || |
Sbjct 452 ACGGCACCTT-CAACCTGACCATGGG-TAGATCACAAGGTTT-CGCGTCTAGCTCT-ACT 397
Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTC-----CCCTATTCGGTTAAG 183
||||| ||||||| | ||||||||||| |||| || | || || | ||||
Sbjct 396 GACTATGCGCCCTA-TCAGACTCGCTTT-CGCTTCGGTTAACGGACCTTAAGCCCTTAAC 339
Query 184 CTTTGCCACTGAAAA-TAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACA 242
||| |||| | || | ||| ||| | | |||||| ||||||| || | ||||||| ||
Sbjct 338 CTT-GCCAGTAAAGACTAACTCGTAGGCTCATTATGCAAAAGGCACACCGTCACCCCACT 280
Query 243 AAGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCG 302
|| ||||||| | ||||||| || | ||||||||| ||||||||||||| || | ||
Sbjct 279 AAA-GGGCTCCGATCGCTTGTAAGCGCATGGTTTCAGGTTCTATTTCACTCCGCTGTTCG 221
Query 303 GGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTA 362
|||||||||| ||||||| |||| |||||||||||||||||||| |||| ||||||||
Sbjct 220 CGGTTCTTTTCACCTTTCCTTCACAGTACTAGTTCACTATCGGTCTCTCAGGAGTATTTA 161
Query 363 GCCTTGGAGGATGGTCCCCCCATATTC 389
||||| ||||||| || || ||||
Sbjct 160 GCCTTACCGGATGGTGCCGGCAAATTC 134
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1237043539072
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |