Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bubalus_20bubalis_20[refseq_20GCF_5F000471725.1_202013-09-30] 366,983 sequences; 2,836,166,969 total letters Query= AAMG01002110.1 Length=382 Score E Sequences producing significant alignments: (Bits) Value seq361957 75.2 3e-11 >seq361957 Length=488 Score = 75.2 bits (82), Expect = 3e-11 Identities = 108/150 (72%), Gaps = 7/150 (5%) Strand=Plus/Minus Query 237 CTCAGCCCTCCACCACCCAGGTGTCCTTGGTTCCACCGCCTTGCGACGAGTTGACGACCA 296 ||||| |||| ||||||||||||||| || || |||||||| |||||||| |||| Sbjct 478 CTCAGATATCCAACACCCAGGTGTCCTTAGTGCCGCCGCCTTGGCTGGAGTTGACCACCA 419 Query 297 GCGAGCCTTCCTTCAGCGCCACGCGGGTCAAGCCACCGGG---CACCAG--GCGGGTTTC 351 ||| |||| ||||| || ||||| | |||||| || |||| | | || || Sbjct 418 ACGAATTTTCCCGGAGCGCTACACGGGTGAGGCCACCAGGAGCCACCCGCACCTGG--TC 361 Query 352 CTTGCCCGAGAGCACGAAGGGTCGCAAGTC 381 | || | |||||| ||||| |||| ||| Sbjct 360 CGCACCAGTGAGCACAAAGGGCCGCAGGTC 331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1115889790400