Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bubalus_20bubalis_20[refseq_20GCF_5F000471725.1_202013-09-30] 366,983 sequences; 2,836,166,969 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq236526 120 1e-24 >seq236526 Length=526 Score = 120 bits (132), Expect = 1e-24 Identities = 122/155 (79%), Gaps = 3/155 (2%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCG-ACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60 |||||| || |||||| | |||| | | ||||| ||||||| ||||||||||||| Sbjct 374 CGAGTCTGAT-AGGGCGCATAGTCAGTAGAGCTAGACGCGAAACCTTGTGATCTACCCAT 432 Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120 || |||| ||||||||| |||||| | ||||||| ||||||| | | |||||||| Sbjct 433 GGTCAGGTTGAAGGTGCCGTAACAGGTACTGGAGGACCGAACCGATAAGCGTTGAAAAGC 492 Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAA 155 | |||||| ||||||||| |||||||||||||| Sbjct 493 TTCCGGATGAACTGTGGGTA-GGGTGAAAGGCTAA 526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1683399455232