Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20bactrianus_20[refseq_20GCF_5F000767855.1_202014-10-23]
35,455 sequences; 1,992,663,268 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq6811 214 3e-53
seq5809 174 3e-41
seq2147 156 7e-36
seq6548 129 1e-27
>seq6811
Length=46538883
Score = 214 bits (236), Expect = 3e-53
Identities = 205/263 (78%), Gaps = 0/263 (0%)
Strand=Plus/Plus
Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91
|| |||||||| || |||||||||||||| ||||| ||| |||||||||| ||| ||||
Sbjct 2129085 CAGCAGTAGGGCAACACTAACCTGTCTCACCACGGTGTAATCCCAGCTCACATTCTCTAT 2129144
Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151
||||||||||||| ||||||||| |||||||||||| |||| |||||| || |||
Sbjct 2129145 CAGTGGGTGAACAACCCAACGCTTGGTGAATTCTGCTTCACAATGACAGGAAGTGCTGAC 2129204
Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211
| ||||||||||||||||| | | || |||| |||| || |||||||| ||||| ||
Sbjct 2129205 ACCGAAGGATCAAAAAGCAGCAACACTGTGAATGCTTAGCCACCACAAGCTGGTTATGCC 2129264
Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGC 271
||| | |||||||||| ||||| || | || | || | ||| ||| ||||
Sbjct 2129265 TGTTGGAACTTTTCTGATACCTCCTGCTTAAAGCCCAAAAGGTCAGAAGTGTCGTGAGGC 2129324
Query 272 CACACTTTCATGGTTTGTATTCA 294
| |||||||||||| | ||||||
Sbjct 2129325 CCCACTTTCATGGTCTATATTCA 2129347
>seq5809
Length=2500910
Score = 174 bits (192), Expect = 3e-41
Identities = 117/131 (89%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
|| ||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||
Sbjct 2436906 TCGTCAGTGGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGGTCACGTTCCCTA 2436847
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150
|||||||||||||||| |||||||| |||| ||||||| |||||||||||||||||
Sbjct 2436846 TTAGTGGGTGAACAATTCAACGCTTGGTGAATACTGCTTCATAATGATAGGAAGAGCCGA 2436787
Query 151 CATCGAAGGAT 161
|| | ||||||
Sbjct 2436786 CACCAAAGGAT 2436776
>seq2147
Length=24672720
Score = 156 bits (172), Expect = 7e-36
Identities = 104/116 (90%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct 4963307 TCATCAGCGGGGTAAAACTAACCTGTCTCACGACAATCTAAACCCAGCTCACGTTCCCTA 4963248
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAG 146
||||||||||||||||||||||||| |||||||| ||| |||||||||||||
Sbjct 4963247 TTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGTTTCACAATGATAGGAAGAG 4963192
>seq6548
Length=8158244
Score = 129 bits (142), Expect = 1e-27
Identities = 98/116 (84%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
|||||||||| ||||||| |||||||||| | |||||| ||||||||| ||||||||
Sbjct 3258267 TCATCAGTAGAATAAAACTGACCTGTCTCACAAGGGTCTACTCCCAGCTCATGTTCCCTA 3258326
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAG 146
|||||||||||||||||||| |||| || ||||||||| |||||||||| ||
Sbjct 3258327 TTAGTGGGTGAACAATCCAATGCTTGGTGACTTCTGCTTCACAATGATAGGAAAAG 3258382
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854097072480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |