Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20dromedarius_20[refseq_20GCF_5F000767585.1_202014-10-21]
32,573 sequences; 2,004,063,690 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq650 217 3e-54
seq228 176 8e-42
seq336 156 7e-36
seq1471 129 1e-27
>seq650
Length=8275019
Score = 217 bits (240), Expect = 3e-54
Identities = 206/263 (78%), Gaps = 0/263 (0%)
Strand=Plus/Minus
Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91
|| |||||||| || |||||||||||||| ||||| ||| |||||||||| ||| ||||
Sbjct 4691359 CAGCAGTAGGGAAACACTAACCTGTCTCACCACGGTGTAATCCCAGCTCACATTCTCTAT 4691300
Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151
||||||||||||| ||||||||| |||||||||||| |||| |||||| || |||
Sbjct 4691299 CAGTGGGTGAACAACCCAACGCTTGGTGAATTCTGCTTCACAATGACAGGAAGTGCTGAC 4691240
Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211
| ||||||||||||||||| | | || |||| |||| || ||||||||| ||||| ||
Sbjct 4691239 ACCGAAGGATCAAAAAGCAGCAACACTGTGAATGCTTAGCCGCCACAAGCTGGTTATGCC 4691180
Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGC 271
||| | |||||||||| ||||| || | || | || | ||| ||| ||||
Sbjct 4691179 TGTTGGAACTTTTCTGATACCTCCTGCTTAAAGCCCAAAAGGTCAGAAGTGTCGTGAGGC 4691120
Query 272 CACACTTTCATGGTTTGTATTCA 294
| |||||||||||| | ||||||
Sbjct 4691119 CCCACTTTCATGGTCTATATTCA 4691097
>seq228
Length=3625708
Score = 176 bits (194), Expect = 8e-42
Identities = 137/162 (85%), Gaps = 1/162 (1%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59
|||| ||| | |||||||| | | || || ||||| ||||||||||||||||||||
Sbjct 2465110 TACTGAGCAGGATTACCATGGCAACAACACATCGTCAGTGGGGTAAAACTAACCTGTCTC 2465051
Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119
| |||||||||||||||| |||||||||||||||||||||||||||| |||||||| |
Sbjct 2465050 ACGACGGTCTAAACCCAGGTCACGTTCCCTATTAGTGGGTGAACAATTCAACGCTTGGTG 2464991
Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGAT 161
||| ||||||| ||||||||||||||||||| | ||||||
Sbjct 2464990 AATACTGCTTCATAATGATAGGAAGAGCCGACACCAAAGGAT 2464949
>seq336
Length=4189118
Score = 156 bits (172), Expect = 7e-36
Identities = 104/116 (90%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct 271807 TCATCAGCGGGGTAAAACTAACCTGTCTCACGACAATCTAAACCCAGCTCACGTTCCCTA 271866
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAG 146
||||||||||||||||||||||||| |||||||| ||| |||||||||||||
Sbjct 271867 TTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGTTTCACAATGATAGGAAGAG 271922
>seq1471
Length=1515421
Score = 129 bits (142), Expect = 1e-27
Identities = 98/116 (84%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
|||||||||| ||||||| |||||||||| | |||||| ||||||||| ||||||||
Sbjct 577680 TCATCAGTAGAATAAAACTGACCTGTCTCACAAGGGTCTACTCCCAGCTCATGTTCCCTA 577621
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAG 146
|||||||||||||||||||| |||| || ||||||||| |||||||||| ||
Sbjct 577620 TTAGTGGGTGAACAATCCAATGCTTGGTGACTTCTGCTTCACAATGATAGGAAAAG 577565
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854121696288
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |