Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20dromedarius_20[refseq_20GCF_5F000767585.1_202014-10-21]
32,573 sequences; 2,004,063,690 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq279 104 2e-17
seq48 82.4 6e-11
>seq279
Length=9007507
Score = 104 bits (114), Expect = 2e-17
Identities = 87/107 (81%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 61270 CAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAAT 61329
||||||||||| || | ||||| || |||||||||||||| || ||| ||| ||||||
Sbjct 4422805 CAGGAGGTGCAGGTTCCAGAGGCTCGCTGTTTCTACGGCTTTCAAATTCTCATCGAGAAT 4422864
Query 61330 GTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376
|| ||||| |||||||||||| | || || || || |||||||| ||
Sbjct 4422865 GTTCACTCAGAGATGTACAGTTTGCTAATAGACACTTACATCAGAGA 4422911
>seq48
Length=13907917
Score = 82.4 bits (90), Expect = 6e-11
Identities = 103/143 (72%), Gaps = 10/143 (7%)
Strand=Plus/Plus
Query 66050 GTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGA 66109
|||||||| || ||||| |||||||| || ||||| || || |||| ||||| ||
Sbjct 114513 GTATACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATCGTTCCCAGGTTCTGCTGG 114572
Query 66110 TTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGG 66169
|| ||||| | ||| ||||| | ||||||||| || || ||||| ||
Sbjct 114573 TTGCTCTTCC----------ATCTTTGTAGAGCATGTACGGGGTACCTGTCTCGGTCTGA 114622
Query 66170 GACTCAATGATGGCGTGCCAAAG 66192
|||||||||||||| | ||||||
Sbjct 114623 GACTCAATGATGGCATACCAAAG 114645
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397410172088720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |