Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camelus_20ferus_20[refseq_20GCF_5F000311805.1_202013-07-30] 13,334 sequences; 2,009,194,609 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq341 93.3 7e-17 seq7782 80.6 4e-13 >seq341 Length=811944 Score = 93.3 bits (102), Expect = 7e-17 Identities = 87/110 (79%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| |||||| | | ||||| ||| |||| | ||||||||||||| | |||||||| Sbjct 193057 CTAGTTAGCATGCCAGTGTCTCATTCATTATTGTAATTAACCAGACAGACTTCTCCACCA 193116 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCA 251 |||| ||| |||| |||| ||||||| ||| ||||||||||||| ||| Sbjct 193117 ACTATGAATGGCCGTGCATTACCACCC--AGAGTCAAGAAAGAGCTGTCA 193164 >seq7782 Length=13838 Score = 80.6 bits (88), Expect = 4e-13 Identities = 56/64 (88%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 186 ACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAG 245 |||||| |||||||||||||||| | |||||||||||||||||| | |||||| |||| Sbjct 3109 ACAAATGGCTCCACCAACTAAGAATGACCATGCACCACCACCCATGGCATCAAGGCAGAG 3168 Query 246 CTAT 249 |||| Sbjct 3169 CTAT 3172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796697074854