Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20ferus_20[refseq_20GCF_5F000311805.1_202013-07-30]
13,334 sequences; 2,009,194,609 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq924 134 4e-29
seq371 122 3e-25
seq7782 111 5e-22
seq1742 104 7e-20
seq1263 102 2e-19
seq145 102 2e-19
seq5250 100 9e-19
seq393 100 9e-19
>seq924
Length=1272094
Score = 134 bits (148), Expect = 4e-29
Identities = 133/167 (80%), Gaps = 9/167 (5%)
Strand=Plus/Minus
Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTA----AGGTACT-ATCAAA 398
||| | | |||||||| ||||||||| |||||||| |||| | || | | | ||||
Sbjct 125692 GCAGGGAATAGCTCTATAATTACCACAGTTATCCAAGTAGGAGAGGAGCAAGTGACCAAA 125633
Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGAT-TGCTTATACTT 457
||| ||||||||||||| ||||||||||||||||||||| | || || |||||||
Sbjct 125632 GCAACTATAACTGATTTAACGAGCCATTCGCAGTTTCACTGAACCAATCTG--TATACTT 125575
Query 458 AGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||| |||| ||||| ||||||| ||| ||||| |||||| |||
Sbjct 125574 AGACATGAATGGTTTAATTTTTGAGAAAAGTATATG-CTACTGTCAG 125529
>seq371
Length=4468941
Score = 122 bits (134), Expect = 3e-25
Identities = 96/112 (86%), Gaps = 5/112 (4%)
Strand=Plus/Minus
Query 395 CAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGAT--TGCTTA 452
|||| ||| |||| |||||||||||||||||| || |||||||||| | ||| |
Sbjct 1360204 CAAAGGAACCATAAGTGATTTAATGAGCCATTCACAATTTCACTGTACTGGCCATGC--A 1360147
Query 453 TACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct 1360146 TACTTAGACATGCATGGCTTAATCTTTGAGAAAAGCATATG-CTACTGGCAG 1360096
>seq7782
Length=13838
Score = 111 bits (122), Expect = 5e-22
Identities = 122/159 (77%), Gaps = 5/159 (3%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59
||| |||||||| ||||| | || |||||| ||||||| ||||| |||| ||| |
Sbjct 4286 GTAATCATTCCATTTACAGGGCCTCAAAAGTCTCCTGTAT---TATTT-TTGTTACTCCT 4341
Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119
| | || || | || ||||||||| | ||||||||||||||||||||| ||| || |
Sbjct 4342 TTTTTGGGTTGGAAGTGAGTAATTTGCACACCTGCTGCCTTCCTTGGATGTAGTACCCAT 4401
Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCC 158
| ||||| |||||| || |||||| | |||| ||| |||
Sbjct 4402 TCCTCAGCCTCCCTTTCAGGAATCAAGCCCTGATTTCCC 4440
Score = 89.7 bits (98), Expect = 2e-15
Identities = 124/171 (73%), Gaps = 11/171 (6%)
Strand=Plus/Plus
Query 338 tttttAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTA-----CT 392
|| ||| |||||||| |||| |||||||| ||||| || || || | | |
Sbjct 4661 TTATTATGATGTATTATATCTACAATTACCA--GTTATTCAAACAGGAAAGGAGCAAGCA 4718
Query 393 ATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTA 452
| |||| ||| | || |||||||||||| ||| || ||||||||||| || |
Sbjct 4719 ACCAAAGGAACCAAAATTGATTTAATGAG---TTCACAATTTCACTGTATCAGCTGGGTG 4775
Query 453 TACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCA 503
||| || |||| | | ||||||||||||||||||||||||| ||| ||||
Sbjct 4776 TACATAAACATCCGTAGCTTAATCTTTGAGACAAGCATATG-TTACGGGCA 4825
>seq1742
Length=9092
Score = 104 bits (114), Expect = 7e-20
Identities = 122/163 (75%), Gaps = 8/163 (5%)
Strand=Plus/Minus
Query 346 ATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTA-----CTATCAAATA 400
|||||||| || || |||||||| ||||| || || || | | | | || |
Sbjct 4783 ATGTATTATCTATACAATTACCA--GTTATTCAAACAGGAAAGGAGCAAGCAACCACAGG 4726
Query 401 AACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGA 460
||| | ||||||||||||||||||||| || ||||||||| || | |||||| |
Sbjct 4725 AACCAAAACTGATTTAATGAGCCATTCACAAATTCACTGTACCAGCTGGGTGTACTTAAA 4666
Query 461 CATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCA 503
||| |||||||||||||||||||||||| |||| ||| ||||
Sbjct 4665 CATCCATGGCTTAATCTTTGAGACAAGCGTATG-TTACGGGCA 4624
>seq1263
Length=2781795
Score = 102 bits (112), Expect = 2e-19
Identities = 90/110 (82%), Gaps = 2/110 (2%)
Strand=Plus/Plus
Query 3 ACTCATTCCAATTACAAGACCCA-AAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61
|||||||||||||||| ||| ||| ||||||||| |||||||||| ||||||||
Sbjct 1981075 ACTCATTCCAATTACAGGACATTGAAAAAGCCCTGTACTGTTATTTATTGTTACTACCTC 1981134
Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTG 111
||| ||| ||| |||||||||||| | |||| |||| ||||||| ||||
Sbjct 1981135 CCCAGGTCAGGAGTGGGTAATTTGCACACCTGTTGCCATCCTTGG-TGTG 1981183
>seq145
Length=2339120
Score = 102 bits (112), Expect = 2e-19
Identities = 77/91 (85%), Gaps = 0/91 (0%)
Strand=Plus/Plus
Query 68 TCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGG 127
|| ||| |||| ||||||| |||||||||||||| ||||||||||||| ||||||||||
Sbjct 1210938 TCTGGAGTGGGGAATTTGCATGCCTGCTGCCTTCCCTGGATGTGGTAGCAGTTTCTCAGG 1210997
Query 128 CTCCCTCTCCGGAATCGAACCCTAATTCCCC 158
|||||| ||| |||| | ||||||| |||
Sbjct 1210998 CTCCCTGTCCAGAATTATATCCTAATTTCCC 1211028
>seq5250
Length=243645
Score = 100 bits (110), Expect = 9e-19
Identities = 119/155 (77%), Gaps = 11/155 (7%)
Strand=Plus/Plus
Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTA-AGGTA----CTATCAAA 398
|||||||||||| ||||| ||| | | |||||||| | || | ||| | | ||||
Sbjct 214936 GCATGTATTAGCGCTAGAGTTAAC-CAGTTATCCAAGCAGAAGAGGCGTGAGCAACCAAA 214994
Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA-TAGATTGCTTATACTT 457
||| ||||||||| ||||||||||||| |||||| |||| | || ||| |||||
Sbjct 214995 GGAACAATAACTGATATAATGAGCCATTCACAGTTTTACTGCACCAGCATGC--GTACTT 215052
Query 458 AGACATGCATGGCTTAATCTTTGAGACAAGCATAT 492
|||| ||||||| || |||||| |||||||||||
Sbjct 215053 AGACGTGCATGGATTCATCTTT--GACAAGCATAT 215085
>seq393
Length=429439
Score = 100 bits (110), Expect = 9e-19
Identities = 129/172 (75%), Gaps = 16/172 (9%)
Strand=Plus/Minus
Query 346 ATGTATTAGCTCTAGAATTACCACGG------TTATCCATGTAGTA----AGGTA-CTAT 394
|| |||| |||||||||||| || ||||| |||||| | ||| | | ||
Sbjct 397446 ATATATTCGCTCTAGAATTAGCAGTTATCTACTTATCTATGTAGGAGAGGAGGGAGCGAT 397387
Query 395 CAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTAT-AGAT-TGCTTA 452
|||| ||| ||||||||||||| |||||| | ||| |||| || || || ||| ||
Sbjct 397386 CAAAGGAACCATAACTGATTTAAGGAGCCACTTGCACTTTCCCTTTACCAGCCCTGCGTA 397327
Query 453 TACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
| |||||||| |||||||||||||||||||||||| || ||||||||||
Sbjct 397326 CA--TAGACATGTTTGGCTTAATCTTTGAGACAAGCATGTG-CTACTGGCAG 397278
Score = 89.7 bits (98), Expect = 2e-15
Identities = 106/143 (74%), Gaps = 13/143 (9%)
Strand=Plus/Minus
Query 45 TTTATTGTCACTACCTCCCCGT--GTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102
||| |||| |||||||| || ||| | | |||||||| ||| ||||||||
Sbjct 397781 TTTCTTGTAACTACCTC---GTAAGTCAGAAGTGGGTAATGTGC--------TGCCTTCC 397733
Query 103 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA 162
|| || ||||||||| ||||| || ||| ||||| | ||| |||||| ||| ||| | |
Sbjct 397732 TTAGACGTGGTAGCCTTTTCTTAGACTCTCTCTCTGAAATAAAACCCTTATTTCCCATCA 397673
Query 163 CCCGTTGATACCATGGTAGGCCA 185
||||| ||||||||||||||
Sbjct 397672 CCCGTGCTCACCATGGTAGGCCA 397650
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510198603264
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |