Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camelus_20ferus_20[refseq_20GCF_5F000311805.1_202013-07-30] 13,334 sequences; 2,009,194,609 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq924 134 4e-29 seq371 122 3e-25 seq7782 111 5e-22 seq1742 104 7e-20 seq1263 102 2e-19 seq145 102 2e-19 seq5250 100 9e-19 seq393 100 9e-19 >seq924 Length=1272094 Score = 134 bits (148), Expect = 4e-29 Identities = 133/167 (80%), Gaps = 9/167 (5%) Strand=Plus/Minus Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTA----AGGTACT-ATCAAA 398 ||| | | |||||||| ||||||||| |||||||| |||| | || | | | |||| Sbjct 125692 GCAGGGAATAGCTCTATAATTACCACAGTTATCCAAGTAGGAGAGGAGCAAGTGACCAAA 125633 Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGAT-TGCTTATACTT 457 ||| ||||||||||||| ||||||||||||||||||||| | || || ||||||| Sbjct 125632 GCAACTATAACTGATTTAACGAGCCATTCGCAGTTTCACTGAACCAATCTG--TATACTT 125575 Query 458 AGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||| |||| ||||| ||||||| ||| ||||| |||||| ||| Sbjct 125574 AGACATGAATGGTTTAATTTTTGAGAAAAGTATATG-CTACTGTCAG 125529 >seq371 Length=4468941 Score = 122 bits (134), Expect = 3e-25 Identities = 96/112 (86%), Gaps = 5/112 (4%) Strand=Plus/Minus Query 395 CAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGAT--TGCTTA 452 |||| ||| |||| |||||||||||||||||| || |||||||||| | ||| | Sbjct 1360204 CAAAGGAACCATAAGTGATTTAATGAGCCATTCACAATTTCACTGTACTGGCCATGC--A 1360147 Query 453 TACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||| ||||||||| |||||||||| Sbjct 1360146 TACTTAGACATGCATGGCTTAATCTTTGAGAAAAGCATATG-CTACTGGCAG 1360096 >seq7782 Length=13838 Score = 111 bits (122), Expect = 5e-22 Identities = 122/159 (77%), Gaps = 5/159 (3%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||| |||||||| ||||| | || |||||| ||||||| ||||| |||| ||| | Sbjct 4286 GTAATCATTCCATTTACAGGGCCTCAAAAGTCTCCTGTAT---TATTT-TTGTTACTCCT 4341 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 | | || || | || ||||||||| | ||||||||||||||||||||| ||| || | Sbjct 4342 TTTTTGGGTTGGAAGTGAGTAATTTGCACACCTGCTGCCTTCCTTGGATGTAGTACCCAT 4401 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCC 158 | ||||| |||||| || |||||| | |||| ||| ||| Sbjct 4402 TCCTCAGCCTCCCTTTCAGGAATCAAGCCCTGATTTCCC 4440 Score = 89.7 bits (98), Expect = 2e-15 Identities = 124/171 (73%), Gaps = 11/171 (6%) Strand=Plus/Plus Query 338 tttttAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTA-----CT 392 || ||| |||||||| |||| |||||||| ||||| || || || | | | Sbjct 4661 TTATTATGATGTATTATATCTACAATTACCA--GTTATTCAAACAGGAAAGGAGCAAGCA 4718 Query 393 ATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTA 452 | |||| ||| | || |||||||||||| ||| || ||||||||||| || | Sbjct 4719 ACCAAAGGAACCAAAATTGATTTAATGAG---TTCACAATTTCACTGTATCAGCTGGGTG 4775 Query 453 TACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCA 503 ||| || |||| | | ||||||||||||||||||||||||| ||| |||| Sbjct 4776 TACATAAACATCCGTAGCTTAATCTTTGAGACAAGCATATG-TTACGGGCA 4825 >seq1742 Length=9092 Score = 104 bits (114), Expect = 7e-20 Identities = 122/163 (75%), Gaps = 8/163 (5%) Strand=Plus/Minus Query 346 ATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTA-----CTATCAAATA 400 |||||||| || || |||||||| ||||| || || || | | | | || | Sbjct 4783 ATGTATTATCTATACAATTACCA--GTTATTCAAACAGGAAAGGAGCAAGCAACCACAGG 4726 Query 401 AACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGA 460 ||| | ||||||||||||||||||||| || ||||||||| || | |||||| | Sbjct 4725 AACCAAAACTGATTTAATGAGCCATTCACAAATTCACTGTACCAGCTGGGTGTACTTAAA 4666 Query 461 CATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCA 503 ||| |||||||||||||||||||||||| |||| ||| |||| Sbjct 4665 CATCCATGGCTTAATCTTTGAGACAAGCGTATG-TTACGGGCA 4624 >seq1263 Length=2781795 Score = 102 bits (112), Expect = 2e-19 Identities = 90/110 (82%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 3 ACTCATTCCAATTACAAGACCCA-AAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||||||||||||||| ||| ||| ||||||||| |||||||||| |||||||| Sbjct 1981075 ACTCATTCCAATTACAGGACATTGAAAAAGCCCTGTACTGTTATTTATTGTTACTACCTC 1981134 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTG 111 ||| ||| ||| |||||||||||| | |||| |||| ||||||| |||| Sbjct 1981135 CCCAGGTCAGGAGTGGGTAATTTGCACACCTGTTGCCATCCTTGG-TGTG 1981183 >seq145 Length=2339120 Score = 102 bits (112), Expect = 2e-19 Identities = 77/91 (85%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 68 TCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGG 127 || ||| |||| ||||||| |||||||||||||| ||||||||||||| |||||||||| Sbjct 1210938 TCTGGAGTGGGGAATTTGCATGCCTGCTGCCTTCCCTGGATGTGGTAGCAGTTTCTCAGG 1210997 Query 128 CTCCCTCTCCGGAATCGAACCCTAATTCCCC 158 |||||| ||| |||| | ||||||| ||| Sbjct 1210998 CTCCCTGTCCAGAATTATATCCTAATTTCCC 1211028 >seq5250 Length=243645 Score = 100 bits (110), Expect = 9e-19 Identities = 119/155 (77%), Gaps = 11/155 (7%) Strand=Plus/Plus Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTA-AGGTA----CTATCAAA 398 |||||||||||| ||||| ||| | | |||||||| | || | ||| | | |||| Sbjct 214936 GCATGTATTAGCGCTAGAGTTAAC-CAGTTATCCAAGCAGAAGAGGCGTGAGCAACCAAA 214994 Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA-TAGATTGCTTATACTT 457 ||| ||||||||| ||||||||||||| |||||| |||| | || ||| ||||| Sbjct 214995 GGAACAATAACTGATATAATGAGCCATTCACAGTTTTACTGCACCAGCATGC--GTACTT 215052 Query 458 AGACATGCATGGCTTAATCTTTGAGACAAGCATAT 492 |||| ||||||| || |||||| ||||||||||| Sbjct 215053 AGACGTGCATGGATTCATCTTT--GACAAGCATAT 215085 >seq393 Length=429439 Score = 100 bits (110), Expect = 9e-19 Identities = 129/172 (75%), Gaps = 16/172 (9%) Strand=Plus/Minus Query 346 ATGTATTAGCTCTAGAATTACCACGG------TTATCCATGTAGTA----AGGTA-CTAT 394 || |||| |||||||||||| || ||||| |||||| | ||| | | || Sbjct 397446 ATATATTCGCTCTAGAATTAGCAGTTATCTACTTATCTATGTAGGAGAGGAGGGAGCGAT 397387 Query 395 CAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTAT-AGAT-TGCTTA 452 |||| ||| ||||||||||||| |||||| | ||| |||| || || || ||| || Sbjct 397386 CAAAGGAACCATAACTGATTTAAGGAGCCACTTGCACTTTCCCTTTACCAGCCCTGCGTA 397327 Query 453 TACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 | |||||||| |||||||||||||||||||||||| || |||||||||| Sbjct 397326 CA--TAGACATGTTTGGCTTAATCTTTGAGACAAGCATGTG-CTACTGGCAG 397278 Score = 89.7 bits (98), Expect = 2e-15 Identities = 106/143 (74%), Gaps = 13/143 (9%) Strand=Plus/Minus Query 45 TTTATTGTCACTACCTCCCCGT--GTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102 ||| |||| |||||||| || ||| | | |||||||| ||| |||||||| Sbjct 397781 TTTCTTGTAACTACCTC---GTAAGTCAGAAGTGGGTAATGTGC--------TGCCTTCC 397733 Query 103 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA 162 || || ||||||||| ||||| || ||| ||||| | ||| |||||| ||| ||| | | Sbjct 397732 TTAGACGTGGTAGCCTTTTCTTAGACTCTCTCTCTGAAATAAAACCCTTATTTCCCATCA 397673 Query 163 CCCGTTGATACCATGGTAGGCCA 185 ||||| |||||||||||||| Sbjct 397672 CCCGTGCTCACCATGGTAGGCCA 397650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510198603264