Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11-
02] 3,268 sequences; 2,410,976,875 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq3061 174 2e-41
seq348 174 2e-41
seq13 136 6e-30
seq5 80.6 4e-13
>seq3061
Length=4694
Score = 174 bits (192), Expect = 2e-41
Identities = 182/234 (78%), Gaps = 4/234 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| || ||||||| ||||| ||||| ||| |||||| |||||| |
Sbjct 3039 GTACAAAGGGCAGGGACTTAATCAACGCAAGCTT-ATGACCCGCACTTACTGGGAATT-C 2982
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|||||| | | || ||||||||| | ||||||||||||| ||||| | ||
Sbjct 2981 CTCGTTCATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCAACGGGTT 2922
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||||| |||| |||| ||| | || || ||| ||||||||||||||||||
Sbjct 2921 ACCCGCGCCTGCCGGCGTAGGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCA 2862
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
|||| | |||||||||||||||||||||||||||||| ||||| || |||||
Sbjct 2861 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 2809
>seq348
Length=37117
Score = 174 bits (192), Expect = 2e-41
Identities = 182/234 (78%), Gaps = 4/234 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| || ||||||| ||||| ||||| ||| |||||| |||||| |
Sbjct 22797 GTACAAAGGGCAGGGACTTAATCAACGCAAGCTT-ATGACCCGCACTTACTGGGAATT-C 22854
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|||||| | | || ||||||||| | ||||||||||||| ||||| | ||
Sbjct 22855 CTCGTTCATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCAACGGGTT 22914
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||||| |||| |||| ||| | || || ||| ||||||||||||||||||
Sbjct 22915 ACCCGCGCCTGCCGGCGTAGGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCA 22974
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
|||| | |||||||||||||||||||||||||||||| ||||| || |||||
Sbjct 22975 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 23027
>seq13
Length=63241923
Score = 136 bits (150), Expect = 6e-30
Identities = 176/235 (75%), Gaps = 6/235 (3%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||| |||||| || ||||| | |||| ||||| ||| |||||| |||||| |
Sbjct 63239315 GTACAAAGGGGAGGGACTTAATCAACACAGGCTT-ATGACCCGCACTTACTGGGAATT-C 63239258
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGA-TGAAATTTCAAAGA-T 118
|||||| | | || |||||| || | |||||||||| || || ||||| | |
Sbjct 63239257 CTCGTTCATGGGGAATAATTGCCATCCCCAATCCCCATCATGAATGGGGGTTCAATGGGT 63239198
Query 119 TACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178
||||| ||||| |||| ||| | || | ||| |||||||||| | |||||
Sbjct 63239197 TACCCC-ACCTGCCGGCGTAGGGTAGGCACATGCTGAGCCAGTCAGTGTAGCACACGTGC 63239139
Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
|||| | |||||||||||||||||||||||||||||| ||||| || |||||
Sbjct 63239138 AGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 63239085
>seq5
Length=88915250
Score = 80.6 bits (88), Expect = 4e-13
Identities = 164/233 (70%), Gaps = 13/233 (6%)
Strand=Plus/Plus
Query 4 CAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTC 63
|||||||| ||||| || || | ||||| ||||| | | |||||| |||||| |||
Sbjct 63551200 CAAAGGGCGGGGACTTA----ACACAAGCTT-ATGACCCACACTTACTGGGAATT-CCTT 63551253
Query 64 GTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGA-TGAAATTTCAAAGATTACC 122
| | | || || |||||| | ||||||||||| | || ||| | | |||||
Sbjct 63551254 GCTCCTGGGGAATAACTGCAATCCCC-ATCCCCATCACAAATGGGATTCAATGGGTTACC 63551312
Query 123 CGGACCTGTCGGCCAAGGTGATAGACTCGTTGA-ATACA-TCAGTGTAGCGCGCGTGCGG 180
||||| || ||| |||| | | | | || |||||||| | ||||| |
Sbjct 63551313 TACACCTGCTGGGGTAGG--ATAGGCACACACACAGCCAGTCAGTGTAATACACGTGCAG 63551370
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
||| | ||||||| |||||||||||||||||||||| ||||| ||| |||||
Sbjct 63551371 CCCTGGACATCTACGGGCATCACAGACCTGTTATTG-CTCAATCTTGGGTGGC 63551422
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751976192620
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |