Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11-
02] 3,268 sequences; 2,410,976,875 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq348 149 3e-33
seq7 149 3e-33
seq31 109 2e-21
seq6 82.4 3e-13
>seq348
Length=37117
Score = 149 bits (164), Expect = 3e-33
Identities = 105/120 (88%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct 17990 TGTTAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTG 17931
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||| || |||||| ||| ||||||||||| ||||| | |||||||||||||||
Sbjct 17930 GTGGAGGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 17871
>seq7
Length=80974532
Score = 149 bits (164), Expect = 3e-33
Identities = 105/120 (88%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct 80969020 TGTTAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTG 80968961
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||| || |||||| ||| ||||||||||| ||||| | |||||||||||||||
Sbjct 80968960 GTGGAGGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 80968901
>seq31
Length=39895921
Score = 109 bits (120), Expect = 2e-21
Identities = 120/160 (75%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| ||| ||||||||||||| | || ||| |||||| | | |||| |||||||
Sbjct 103729 GAGTCGGATTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCACCTAAGGCTAAAT 103788
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| ||| ||||||||||| ||||||| || | |||| ||||||| |||||| |
Sbjct 103789 ACCGGCACGAGACCGATAGTCAACAAGTACCGTAAGGGAAATTTGAAAAGAACTTTGAAG 103848
Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|||||||| || || ||||||| ||| | ||| || ||
Sbjct 103849 AGAGAGTTCAAGAGGGCGTGAAACCGTTAAGAGGTAAACG 103888
>seq6
Length=77573801
Score = 82.4 bits (90), Expect = 3e-13
Identities = 98/135 (73%), Gaps = 10/135 (7%)
Strand=Plus/Minus
Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608
||| | ||||| || |||| ||||| ||||| ||||||| ||||||| | ||||||
Sbjct 16667570 GAGCATGAGCACAGGTGTTAGGACCAGAAAGGTGGTGAATGATGCCTGGGCACAGTGAAG 16667511
Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668
||||||||| ||||| |||| ||| || | |||||||| | ||| ||
Sbjct 16667510 CCAGAGGAAGCTCTGCTGGA----------GGTCCTAGTATGCAAATCCGTAGTCCAACC 16667461
Query 669 TGGGTATAGGGGCGA 683
|||||| ||||||||
Sbjct 16667460 TGGGTACAGGGGCGA 16667446
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079929901400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |