Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11-
02] 3,268 sequences; 2,410,976,875 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq3061 96.9 4e-18
seq348 96.9 4e-18
seq13 89.7 5e-16
seq39 87.8 2e-15
>seq3061
Length=4694
Score = 96.9 bits (106), Expect = 4e-18
Identities = 129/176 (73%), Gaps = 5/176 (3%)
Strand=Plus/Plus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC---TTTGCTCGAATACATTACCAT 69
||||||||||||||||||||| |||||||||||||| || | |||| | |
Sbjct 2142 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 2201
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
|||||||| ||||||||| ||||||||||||||| ||||| | ||| | | ||||
Sbjct 2202 GGAATAATGGAATAGGAC-CGCGGTTCTATTTTGTTGGTTT-TCGGAACTGAGGCCATGA 2259
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185
| || | ||| | |||||| | ||||| | | ||||||||||||||||
Sbjct 2260 TTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGA 2315
>seq348
Length=37117
Score = 96.9 bits (106), Expect = 4e-18
Identities = 129/176 (73%), Gaps = 5/176 (3%)
Strand=Plus/Minus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC---TTTGCTCGAATACATTACCAT 69
||||||||||||||||||||| |||||||||||||| || | |||| | |
Sbjct 23694 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 23635
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
|||||||| ||||||||| ||||||||||||||| ||||| | ||| | | ||||
Sbjct 23634 GGAATAATGGAATAGGAC-CGCGGTTCTATTTTGTTGGTTT-TCGGAACTGAGGCCATGA 23577
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185
| || | ||| | |||||| | ||||| | | ||||||||||||||||
Sbjct 23576 TTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGA 23521
>seq13
Length=63241923
Score = 89.7 bits (98), Expect = 5e-16
Identities = 129/176 (73%), Gaps = 7/176 (4%)
Strand=Plus/Plus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC---TTTGCTCGAATACATTACCAT 69
||||||||||||||||||||| |||||||||||||| || | |||| | |
Sbjct 63238435 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 63238494
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
|||||||| ||||||||| ||||||||||||||| ||||| | ||| | | ||||
Sbjct 63238495 GGAATAATGGAATAGGAC-CGCGGTTCTATTTTGTTGGTTT-TCGGAACTGAGGCCATGA 63238552
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATT-CAATTGTCAAAGGTGAAATTCTTGG 184
| || | |||| | || || | |||| || | | | |||||||||||||||
Sbjct 63238553 TTAAGAGGGATGGCTGGAGGCATTCATATTGCACCTCT-AGAGGTGAAATTCTTGG 63238607
>seq39
Length=123869142
Score = 87.8 bits (96), Expect = 2e-15
Identities = 81/101 (80%), Gaps = 4/101 (4%)
Strand=Plus/Plus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC---TTTGCTCGAATACATTACCAT 69
|||||||||||||||||| || |||||||||||||| ||| |||||| | |
Sbjct 64188797 TTTACTTTGAAAAAATTACAGTGTTCAAAGCAGGCCCAAGCTGCCTGAATACCGCAGCTA 64188856
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110
|||||||| ||||||||| | ||||||||||||| |||||
Sbjct 64188857 GGAATAATGGAATAGGAC-CGTGGTTCTATTTTGTTGGTTT 64188896
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511983790720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |