Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11-
02] 3,268 sequences; 2,410,976,875 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq3061 197 3e-48
seq348 197 3e-48
seq13 161 2e-37
seq5 95.1 2e-17
>seq3061
Length=4694
Score = 197 bits (218), Expect = 3e-48
Identities = 201/258 (78%), Gaps = 3/258 (1%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | ||| | |||| || | ||||| ||||||||||||||||
Sbjct 2783 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 2840
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||| | |||| ||||||||||||||||||| | || || || | |
Sbjct 2841 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTCAGCGTGTGCCTAC 2900
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
||| ||||| ||| |||||| | | || | | ||||| ||||||| | | ||||
Sbjct 2901 CCTACGCCGGCAGGCGCGGGTAACCCGTTGAACCCCATTCGTGATGGGGATCGGGGATTG 2960
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
|||||||| | | | |||||||||| || |||||| ||| ||||| ||| |||||||||
Sbjct 2961 CAATTATTCCCCATGAACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTTGCGTTGATT 3020
Query 311 ACGTCCCTGCCCTTTGTA 328
| ||||||||||||||||
Sbjct 3021 AAGTCCCTGCCCTTTGTA 3038
>seq348
Length=37117
Score = 197 bits (218), Expect = 3e-48
Identities = 201/258 (78%), Gaps = 3/258 (1%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | ||| | |||| || | ||||| ||||||||||||||||
Sbjct 23053 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 22996
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||| | |||| ||||||||||||||||||| | || || || | |
Sbjct 22995 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTCAGCGTGTGCCTAC 22936
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
||| ||||| ||| |||||| | | || | | ||||| ||||||| | | ||||
Sbjct 22935 CCTACGCCGGCAGGCGCGGGTAACCCGTTGAACCCCATTCGTGATGGGGATCGGGGATTG 22876
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
|||||||| | | | |||||||||| || |||||| ||| ||||| ||| |||||||||
Sbjct 22875 CAATTATTCCCCATGAACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTTGCGTTGATT 22816
Query 311 ACGTCCCTGCCCTTTGTA 328
| ||||||||||||||||
Sbjct 22815 AAGTCCCTGCCCTTTGTA 22798
>seq13
Length=63241923
Score = 161 bits (178), Expect = 2e-37
Identities = 195/259 (75%), Gaps = 5/259 (2%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | ||| | |||| || | ||||| ||||||||||||||||
Sbjct 63239059 CTTCTTAGAGGGACAAGTGGCATTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 63239116
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||| | |||| ||||| | ||||||||||| | || | || | |
Sbjct 63239117 ATGCCCTTAGATGTCCGGGGCTGCACGTGTGCTACACTGACTGGCTCAGCATGTGCCTAC 63239176
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAA-ACTCTGTCGTGCTGGGGATAGAGCATT 249
||| ||||| |||| |||||| | | || | | || || ||||||| | | ||
Sbjct 63239177 CCTACGCCGGCAGGT-GGGGTAACCCATTGAACCCCCATTCATGATGGGGATTGGGGATG 63239235
Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309
||||||||| | | | |||||||||| || |||||| ||| ||||| ||| | ||||||
Sbjct 63239236 GCAATTATTCCCCATGAACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCCTGTGTTGAT 63239295
Query 310 TACGTCCCTGCCCTTTGTA 328
|| |||||| |||||||||
Sbjct 63239296 TAAGTCCCTCCCCTTTGTA 63239314
>seq5
Length=88915250
Score = 95.1 bits (104), Expect = 2e-17
Identities = 178/256 (70%), Gaps = 8/256 (3%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | || | |||| | ||| ||||| ||||||||||||||||
Sbjct 63551448 CTTCTTAGAGGGACAAATGGTGTTCAGCC-ACCCAAGATTGAG-CAATAACAGGTCTGTG 63551391
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||| ||||||| | |||| ||||| | ||||||||| | | || | |
Sbjct 63551390 ATGCCCGTAGATGTCCAGGGCTGCACGTGTATTACACTGACTGGCTGTGTGTGTGCCTAT 63551331
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
||| || | |||| | ||||| | | || | | | ||| ||||||| | | ||||
Sbjct 63551330 CCTACCCCAGCAGGTGTAGGTAACCCATTGAATCCCATTTGTGATGGGGAT-GGGGATTG 63551272
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
|| ||||| | | | | |||||| || |||||| | | ||||| ||| | | ||
Sbjct 63551271 CAGTTATTCCCCAGGAGCAAGGAATTCCCAGTAAGTGTGGGTCATAAGCTTGTG----TT 63551216
Query 311 ACGTCCCTGCCCTTTG 326
| ||||| ||||||||
Sbjct 63551215 AAGTCCCCGCCCTTTG 63551200
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947169045504
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |