Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11- 02] 3,268 sequences; 2,410,976,875 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq3061 383 5e-104 seq348 383 5e-104 seq13 354 2e-95 seq1 329 1e-87 seq30 197 4e-48 seq11 187 8e-45 seq7 122 3e-25 seq27 111 5e-22 seq20 75.2 3e-11 >seq3061 Length=4694 Score = 383 bits (424), Expect = 5e-104 Identities = 419/555 (75%), Gaps = 55/555 (10%) Strand=Plus/Minus Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||||| Sbjct 1909 ACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACCTC 1850 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1849 CCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 1790 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 ||||||||||||||||||||||||||||| ||||||||| |||||| | |||||||||| Sbjct 1789 CTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTCACCCGTGGTCACCATGGTAG 1730 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241 || |||||||||||||||||||||||||| || ||||| | |||||| | | Sbjct 1729 GCACGGCGACTACCATCGAAAGTTGATAGGGCAGACGTTCGAATGGGTCGTCGCCGCCAC 1670 Query 242 -AAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAA-------GGAGCC------ 285 || | |||||| | | ||||| || ||||||| || ||| Sbjct 1669 GGGGGGCGTGCGATCGGCCCGAGGTTATCTAGAGTCACCAAAGCCGCCGGCGCCCGCCCC 1610 Query 286 ----------CCGAAGG----------GCGTTGGTTTTTTATCTAATAAATACAC----C 321 ||| ||| | ||||| |||| |||| |||||| ||| | Sbjct 1609 CCGGCCGGGGCCGGAGGGAGGCTGACCGGGTTGG-TTTTGATCTGATAAATGCACGCATC 1551 Query 322 CCTTCCGAAGTCGGGGT-------TTTTAGCATGTATTAGCTCTAGAATTACCACGGTTA 374 || ||| ||||| | |||||||||||||||||||||||||| |||| Sbjct 1550 CCCCCCGCGAGGGGGGTCAGCGCCCGTCGGCATGTATTAGCTCTAGAATTACCACAGTTA 1491 Query 375 TCCATGTAGTA-AG----GTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGC 429 |||| |||| | || | | | |||| ||| ||||||||||||||||||||||||| Sbjct 1490 TCCAAGTAGGAGAGGAGCGAGCGACCAAAGGAACCATAACTGATTTAATGAGCCATTCGC 1431 Query 430 AGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCA 489 |||||||||||| | | ||||||||||||||||||||||||||||||||||||| Sbjct 1430 AGTTTCACTGTACCGGCCGTGCGTACTTAGACATGCATGGCTTAATCTTTGAGACAAGCA 1371 Query 490 TATGACTACTGGCAG 504 |||| |||||||||| Sbjct 1370 TATG-CTACTGGCAG 1357 >seq348 Length=37117 Score = 383 bits (424), Expect = 5e-104 Identities = 419/555 (75%), Gaps = 55/555 (10%) Strand=Plus/Plus Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||||| Sbjct 23927 ACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACCTC 23986 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 23987 CCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 24046 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 ||||||||||||||||||||||||||||| ||||||||| |||||| | |||||||||| Sbjct 24047 CTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTCACCCGTGGTCACCATGGTAG 24106 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241 || |||||||||||||||||||||||||| || ||||| | |||||| | | Sbjct 24107 GCACGGCGACTACCATCGAAAGTTGATAGGGCAGACGTTCGAATGGGTCGTCGCCGCCAC 24166 Query 242 -AAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAA-------GGAGCC------ 285 || | |||||| | | ||||| || ||||||| || ||| Sbjct 24167 GGGGGGCGTGCGATCGGCCCGAGGTTATCTAGAGTCACCAAAGCCGCCGGCGCCCGCCCC 24226 Query 286 ----------CCGAAGG----------GCGTTGGTTTTTTATCTAATAAATACAC----C 321 ||| ||| | ||||| |||| |||| |||||| ||| | Sbjct 24227 CCGGCCGGGGCCGGAGGGAGGCTGACCGGGTTGG-TTTTGATCTGATAAATGCACGCATC 24285 Query 322 CCTTCCGAAGTCGGGGT-------TTTTAGCATGTATTAGCTCTAGAATTACCACGGTTA 374 || ||| ||||| | |||||||||||||||||||||||||| |||| Sbjct 24286 CCCCCCGCGAGGGGGGTCAGCGCCCGTCGGCATGTATTAGCTCTAGAATTACCACAGTTA 24345 Query 375 TCCATGTAGTA-AG----GTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGC 429 |||| |||| | || | | | |||| ||| ||||||||||||||||||||||||| Sbjct 24346 TCCAAGTAGGAGAGGAGCGAGCGACCAAAGGAACCATAACTGATTTAATGAGCCATTCGC 24405 Query 430 AGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCA 489 |||||||||||| | | ||||||||||||||||||||||||||||||||||||| Sbjct 24406 AGTTTCACTGTACCGGCCGTGCGTACTTAGACATGCATGGCTTAATCTTTGAGACAAGCA 24465 Query 490 TATGACTACTGGCAG 504 |||| |||||||||| Sbjct 24466 TATG-CTACTGGCAG 24479 >seq13 Length=63241923 Score = 354 bits (392), Expect = 2e-95 Identities = 416/557 (75%), Gaps = 59/557 (11%) Strand=Plus/Minus Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||||| Sbjct 63238202 ACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACCTC 63238143 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 63238142 CCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 63238083 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 ||||||||||||||||||||||||||||| ||||||||| |||||| | |||||||||| Sbjct 63238082 CTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTCACCCGTGGTCACCATGGTAG 63238023 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241 || |||||||||||||||||||||||||| || ||||| | |||||| | | Sbjct 63238022 GCACGGCGACTACCATCGAAAGTTGATAGGGCAGACGTTCGAATGGGTCGTCGCCGCCAC 63237963 Query 242 -AAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAA-------GGAGCC------ 285 || | |||||| | | ||||| || ||||||| || ||| Sbjct 63237962 GGGGGGCGTGCGATCGGCCCGAGGTTATCTAGAGTCACCAAAGCCGCCGGCGCCCGCCCC 63237903 Query 286 ----------CCGAAGG----------GCGTTGGTTTTTTATCTAATAAATACAC----C 321 ||| ||| | ||||| |||| |||| |||||| ||| | Sbjct 63237902 CCGGCCGGGGCCGGAGGGAGGCTGACCGGGTTGG-TTTTGATCTGATAAATGCACGCATC 63237844 Query 322 CCTTCCGAAGTCGGGGT-------TTTTAGCATGTATTAGCTCTAGAATTACCACGGTTA 374 || ||| ||||| | |||||||||||||||||||||||||| | || Sbjct 63237843 CCCCCCGCGAGGGGGGTCAGCGCCCCTGGGCATGTATTAGCTCTAGAATTACCACAGATA 63237784 Query 375 TCCATGTAGTA-AG----GTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGC 429 |||| |||| | || | | | ||| ||| ||||||||||||| ||||||| || Sbjct 63237783 TCCAAGTAGGAGAGGAGCGAGCGACCAATGGAACCATAACTGATTTAAGGAGCCATGTGC 63237724 Query 430 AGTTTCACTGTA-TAGAT-TGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAG 487 ||| |||||||| || | ||| ||||||||||||||||||||||||||| |||||||| Sbjct 63237723 AGTGTCACTGTACCAGCTGTGC--ATACTTAGACATGCATGGCTTAATCTTGGAGACAAG 63237666 Query 488 CATATGACTACTGGCAG 504 |||||| |||||| ||| Sbjct 63237665 CATATG-CTACTGTCAG 63237650 >seq1 Length=122678785 Score = 329 bits (364), Expect = 1e-87 Identities = 381/513 (74%), Gaps = 53/513 (10%) Strand=Plus/Minus Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102 ||||| | ||||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct 60599897 TATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCC 60599838 Query 103 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA 162 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | Sbjct 60599837 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTCA 60599778 Query 163 CCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTG 222 ||||| | |||||||||||| |||||||||||||||||||||||||| || | Sbjct 60599777 CCCGTGGTCACCATGGTAGGCACGGCGACTACCATCGAAAGTTGATAGGGCAGACGTTCG 60599718 Query 223 AATGAACCATCGCCGGCTC-AAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAA 279 |||| | |||||| | | || | |||||| | | ||||| || ||||||| Sbjct 60599717 AATGGGTCGTCGCCGCCACGGGGGGCGTGCGATCGGCCCGAGGTTATCTAGAGTCACCAA 60599658 Query 280 -------GGAGCC----------------CCGAAGG----------GCGTTGGTTTTTTA 306 || ||| ||| ||| | ||||| |||| | Sbjct 60599657 AGCCGCCGGCGCCCGCCCCCCGGCCGGGGCCGGAGGGAGGCTGACCGGGTTGG-TTTTGA 60599599 Query 307 TCTAATAAATACAC----CCCTTCCGAAGTCGGGGT-------TTTTAGCATGTATTAGC 355 ||| || ||| ||| ||| ||| ||||| | |||||||||||| Sbjct 60599598 TCTGATTAATGCACGCATCCCCCCCGCGAGGGGGGTCAGCGCCCGTCGGCATGTATTAGC 60599539 Query 356 TCTAGAATTACCACGGTTATCCATGTAGTA-AGGTACTA---TCAAATAAACGATAACTG 411 ||||||| |||||| |||||||| |||| | ||| | | | || ||| ||||||| Sbjct 60599538 TCTAGAAATACCACAGTTATCCAAGTAGGAGAGGAGCGAGCGACCAAGGAACCATAACTG 60599479 Query 412 ATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCT 471 |||||||||||||||||||||||||||||| | | |||||| |||||||||||| Sbjct 60599478 ATTTAATGAGCCATTCGCAGTTTCACTGTACGGGCCGTGCGTACTTACACATGCATGGCT 60599419 Query 472 TAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||| ||| |||||| Sbjct 60599418 TAATCTTTGAGACAAGCATATG-CTAGTGGCAG 60599387 >seq30 Length=40214260 Score = 197 bits (218), Expect = 4e-48 Identities = 187/236 (79%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 3 ACTCATTCCAATTACAAGACCCA-AAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||||||||||| ||| | || |||||| ||||||| ||||| | ||||||||| Sbjct 26560509 ACTCATTCCAATGACAGGGCCTGGAAAGAGTCCTGTATTGTTATTTTTCATCACTACCTT 26560450 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 ||| ||| ||| |||||| ||||| ||||| ||||||||||||||||||||||| |||| Sbjct 26560449 CCCTGGTCAGGAGTGGGTAGTTTGCACGCCT-CTGCCTTCCTTGGATGTGGTAGCTGTTT 26560391 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 ||||||||||||||||||||||||| || ||||||| || ||| | |||||||||| Sbjct 26560390 CTCAGGCTCCCTCTCCGGAATCGAATTCTGATTCCCCACCACTCGTGGTCACCATGGTAG 26560331 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG 237 ||| ||||||| || |||||||||| |||| || |||| ||| |||| Sbjct 26560330 GCCTGGGGACTACCATTGAGAGTTGATAGGCCAGACTTTCCAATGGGTCATTGCCG 26560275 >seq11 Length=74389097 Score = 187 bits (206), Expect = 8e-45 Identities = 185/235 (79%), Gaps = 12/235 (5%) Strand=Plus/Plus Query 3 ACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCC 62 |||||||||||| || | || ||||| |||| |||||| | |||||||||||| Sbjct 26805994 ACTCATTCCAATGAC--GGCCTCAAAGAATCCTG-----GTATTT-TCGTCACTACCTCC 26806045 Query 63 CCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTC 122 || || ||| ||||||||| || ||||||||||||| |||||||||||||||||||| Sbjct 26806046 CCAGATCAGGAGTGGGTAATT-GCACGCCTGCTGCCTTACTTGGATGTGGTAGCCGTTTT 26806104 Query 123 TCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGG 182 ||||||||||||||| |||||||||||| ||||||| | |||| ||| |||| |||||| Sbjct 26806105 TCAGGCTCCCTCTCCAGAATCGAACCCTGATTCCCCATCACCCCTTGTCACCAAGGTAGG 26806164 Query 183 CCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG 237 | ||||||| |||||||||||| || |||||||| | |||||| Sbjct 26806165 CACGGCAACTACCAT---AAGTTGATAGGGAGGACGTTTGAATGTGTCGTCGCCG 26806216 >seq7 Length=80974532 Score = 122 bits (134), Expect = 3e-25 Identities = 130/169 (77%), Gaps = 6/169 (4%) Strand=Plus/Minus Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 ||||||| |||||||| | || ||||||| ||| ||| ||||||| |||||| || Sbjct 27202909 ACTCATTGCAATTACAGGGCCTCAAAAGACTCCTCTAT---TATTTATCATCACTATGTC 27202853 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 || | |||| ||||||||||| | |||||||| ||||||||| | ||||| |||| Sbjct 27202852 CCAGGA--GGGACTGGGTAATTTGTGTGCCTGCTGACTTCCTTGGGGGAGGTAGGGGTTT 27202795 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGA 170 |||| ||||||||| |||||| |||||| ||| || | ||| || || Sbjct 27202794 TTCAGTCTCCCTCTCTGGAATCAAACCCTGATTGCCTATCACCAGTCGA 27202746 Score = 98.7 bits (108), Expect = 3e-18 Identities = 83/102 (81%), Gaps = 4/102 (4%) Strand=Plus/Plus Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAA----GGTACTATCAAAT 399 ||||||||||| |||||| ||| ||| |||||||| |||| || || || | |||| Sbjct 23310435 GCATGTATTAGTTCTAGACTTATCACAGTTATCCAAGTAGGAAAAGAGGAACCACCAAAG 23310494 Query 400 AAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA 441 ||| |||||||||||||||||||||| |||||||||||| Sbjct 23310495 GAACAATAACTGATTTAATGAGCCATTTATAGTTTCACTGTA 23310536 >seq27 Length=45876710 Score = 111 bits (122), Expect = 5e-22 Identities = 93/108 (86%), Gaps = 6/108 (6%) Strand=Plus/Plus Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTAT-AGAT-TGCTTATACT 456 |||||| ||||||||||||||||||||| ||||||||||||| || ||| || | Sbjct 1671808 TAAACG-TAACTGATTTAATGAGCCATTTGCAGTTTCACTGTGCCAGCCATGCGTA--CC 1671864 Query 457 TAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct 1671865 TAGACATGCATGGCTCAATCTTTGAGACAAGCATAT-TCTACTGGCAG 1671911 >seq20 Length=58134056 Score = 75.2 bits (82), Expect = 3e-11 Identities = 71/91 (78%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 71 GGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTC 130 ||| |||| ||||| | ||||| |||| | | | ||||||| | | ||||||||||||| Sbjct 39351120 GGAATGGGGAATTTACATGCCTGATGCCATTCCTAGATGTGGCATCTGTTTCTCAGGCTC 39351179 Query 131 CCTCTCCGGAATCGAACCCTAATTCCCCGTT 161 ||||||| ||| | | ||| ||||||| || Sbjct 39351180 CCTCTCCAGAACCATATCCTGATTCCCCTTT 39351210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510350640128