Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11-
02] 3,268 sequences; 2,410,976,875 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq21 111 1e-19
seq13 98.7 8e-16
seq17 82.4 6e-11
>seq21
Length=50858623
Score = 111 bits (122), Expect = 1e-19
Identities = 111/144 (77%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 66049 GGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTG 66108
||||||||| || ||||| |||||||| || ||||| || || ||||| ||||| ||
Sbjct 26618045 GGTATACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATCGTTCCCAAGTTCTGCTG 26617986
Query 66109 ATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168
|| || || ||||| || | ||| ||||| | ||||||||| || || ||||| ||
Sbjct 26617985 GTTGCTTTTCCGATTACAGGAATCTTTGTAGAGCATGTACGGGGTACCTGTCTCTGTCTG 26617926
Query 66169 GGACTCAATGATGGCGTGCCAAAG 66192
|||||||||||||| | ||||||
Sbjct 26617925 AGACTCAATGATGGCATACCAAAG 26617902
>seq13
Length=63241923
Score = 98.7 bits (108), Expect = 8e-16
Identities = 86/107 (80%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 61270 CAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAAT 61329
|||||||| || || | ||||| || |||||||| ||||| || ||| ||| ||||||
Sbjct 3825669 CAGGAGGTACAGGTTCCAGAGGCTCGCTGTTTCTATGGCTTTCAAATTCTCATCGAGAAT 3825610
Query 61330 GTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376
|||||||| |||||||||||| | || || || || |||||||| ||
Sbjct 3825609 GTCCACTCAGAGATGTACAGTTTGCTAATAGACACTTACATCAGAGA 3825563
>seq17
Length=64289059
Score = 82.4 bits (90), Expect = 6e-11
Identities = 69/85 (81%), Gaps = 0/85 (0%)
Strand=Plus/Plus
Query 61286 CGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGT 61345
|||| || || |||||||| |||||||| ||||||||||| || ||||||| |||||||
Sbjct 7108378 CGGAAGCCCGCTGTTTCTATGGCTTCCAAATTGCCATGGAAAACATCCACTCTGAGATGT 7108437
Query 61346 ACAGTGTTCTCATCGATACGTACAT 61370
| ||| | ||||| || || || ||
Sbjct 7108438 ATAGTCTCCTCATTGACACTTATAT 7108462
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397552165363520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |