Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11- 02] 3,268 sequences; 2,410,976,875 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq21 111 1e-19 seq13 98.7 8e-16 seq17 82.4 6e-11 >seq21 Length=50858623 Score = 111 bits (122), Expect = 1e-19 Identities = 111/144 (77%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 66049 GGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTG 66108 ||||||||| || ||||| |||||||| || ||||| || || ||||| ||||| || Sbjct 26618045 GGTATACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATCGTTCCCAAGTTCTGCTG 26617986 Query 66109 ATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168 || || || ||||| || | ||| ||||| | ||||||||| || || ||||| || Sbjct 26617985 GTTGCTTTTCCGATTACAGGAATCTTTGTAGAGCATGTACGGGGTACCTGTCTCTGTCTG 26617926 Query 66169 GGACTCAATGATGGCGTGCCAAAG 66192 |||||||||||||| | |||||| Sbjct 26617925 AGACTCAATGATGGCATACCAAAG 26617902 >seq13 Length=63241923 Score = 98.7 bits (108), Expect = 8e-16 Identities = 86/107 (80%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 61270 CAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAAT 61329 |||||||| || || | ||||| || |||||||| ||||| || ||| ||| |||||| Sbjct 3825669 CAGGAGGTACAGGTTCCAGAGGCTCGCTGTTTCTATGGCTTTCAAATTCTCATCGAGAAT 3825610 Query 61330 GTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376 |||||||| |||||||||||| | || || || || |||||||| || Sbjct 3825609 GTCCACTCAGAGATGTACAGTTTGCTAATAGACACTTACATCAGAGA 3825563 >seq17 Length=64289059 Score = 82.4 bits (90), Expect = 6e-11 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 61286 CGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGT 61345 |||| || || |||||||| |||||||| ||||||||||| || ||||||| ||||||| Sbjct 7108378 CGGAAGCCCGCTGTTTCTATGGCTTCCAAATTGCCATGGAAAACATCCACTCTGAGATGT 7108437 Query 61346 ACAGTGTTCTCATCGATACGTACAT 61370 | ||| | ||||| || || || || Sbjct 7108438 ATAGTCTCCTCATTGACACTTATAT 7108462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397552165363520