Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capra_20aegagrus_20[genbank_20GCA_5F000978405.1_202015-04-24] 89,498 sequences; 2,828,873,048 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq63232 185 4e-45 seq83875 141 4e-32 >seq63232 Length=347 Score = 185 bits (204), Expect = 4e-45 Identities = 102/102 (100%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 213 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 154 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 |||||||||||||||||||||||||||||||||||||||||| Sbjct 153 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 112 >seq83875 Length=967 Score = 141 bits (156), Expect = 4e-32 Identities = 90/98 (92%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||| || ||||||||||||||||||||| | Sbjct 500 GGAAAAGAAACTAACCAGGATTCCCTCAGTAATGGAGAGTGAACAGGGAAGAGCCCAATG 559 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGG 98 | ||||||| |||||||||||||| |||| |||||||| Sbjct 560 CTGAATCCCTGCCCCGCGGTGGGGTGCGGTACATGTGG 597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230206684320