Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capra_20aegagrus_20[genbank_20GCA_5F000978405.1_202015-04-24] 89,498 sequences; 2,828,873,048 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq17 87.8 2e-15 >seq17 Length=72096382 Score = 87.8 bits (96), Expect = 2e-15 Identities = 81/101 (80%), Gaps = 4/101 (4%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC---TTTGCTCGAATACATTACCAT 69 ||||||||||||||||||||| |||||||||||||| || | |||| | | Sbjct 48707657 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 48707716 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110 |||||||| ||||||||| ||||||||||||||| ||||| Sbjct 48707717 GGAATAATGGAATAGGAC-CGCGGTTCTATTTTGTTGGTTT 48707756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511556089920