Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capra_20hircus_20[refseq_20GCF_5F001704415.1_202016-08-24] 29,907 sequences; 2,922,813,246 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq25752 185 4e-45 seq25556 185 4e-45 seq13466 185 4e-45 seq896 185 4e-45 seq518 185 4e-45 seq506 185 4e-45 seq461 185 4e-45 seq251 185 4e-45 seq10 141 4e-32 seq1603 118 5e-25 >seq25752 Length=14080 Score = 185 bits (204), Expect = 4e-45 Identities = 102/102 (100%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3908 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 3967 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 |||||||||||||||||||||||||||||||||||||||||| Sbjct 3968 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 4009 >seq25556 Length=14220 Score = 185 bits (204), Expect = 4e-45 Identities = 102/102 (100%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6696 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 6637 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 |||||||||||||||||||||||||||||||||||||||||| Sbjct 6636 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 6595 >seq13466 Length=18931 Score = 185 bits (204), Expect = 4e-45 Identities = 102/102 (100%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 15002 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 15061 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 |||||||||||||||||||||||||||||||||||||||||| Sbjct 15062 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 15103 Score = 185 bits (204), Expect = 4e-45 Identities = 102/102 (100%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 17380 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 17321 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 |||||||||||||||||||||||||||||||||||||||||| Sbjct 17320 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 17279 Score = 132 bits (146), Expect = 2e-29 Identities = 93/101 (92%), Gaps = 4/101 (4%) Strand=Plus/Minus Query 3 AAAAGAAACTAACCAGGATTCCCTCAGTAACGGCG-AGTGAACAGGGAAGAGCCCAGCGC 61 ||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||| Sbjct 1071 AAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGTAGTGAACAGGGAA-AG-CCAGCGC 1014 Query 62 CGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||| ||| ||||||||||||||||| ||||||| Sbjct 1013 CGAATCCCC-CCCGCCGGTGGGGCGCGGGACAGTTGGCGTA 974 >seq896 Length=22005 Score = 185 bits (204), Expect = 4e-45 Identities = 102/102 (100%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2815 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 2874 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 |||||||||||||||||||||||||||||||||||||||||| Sbjct 2875 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 2916 >seq518 Length=18578 Score = 185 bits (204), Expect = 4e-45 Identities = 102/102 (100%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 13131 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 13190 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 |||||||||||||||||||||||||||||||||||||||||| Sbjct 13191 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 13232 >seq506 Length=19097 Score = 185 bits (204), Expect = 4e-45 Identities = 102/102 (100%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8067 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 8008 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 |||||||||||||||||||||||||||||||||||||||||| Sbjct 8007 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 7966 >seq461 Length=21300 Score = 185 bits (204), Expect = 4e-45 Identities = 102/102 (100%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 16723 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 16782 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 |||||||||||||||||||||||||||||||||||||||||| Sbjct 16783 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 16824 >seq251 Length=33659 Score = 185 bits (204), Expect = 4e-45 Identities = 102/102 (100%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 27347 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 27288 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 |||||||||||||||||||||||||||||||||||||||||| Sbjct 27287 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 27246 >seq10 Length=101087560 Score = 141 bits (156), Expect = 4e-32 Identities = 90/98 (92%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||| || ||||||||||||||||||||| | Sbjct 77770276 GGAAAAGAAACTAACCAGGATTCCCTCAGTAATGGAGAGTGAACAGGGAAGAGCCCAATG 77770217 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGG 98 | ||||||| |||||||||||||| |||| |||||||| Sbjct 77770216 CTGAATCCCTGCCCCGCGGTGGGGTGCGGTACATGTGG 77770179 >seq1603 Length=10953 Score = 118 bits (130), Expect = 5e-25 Identities = 88/98 (90%), Gaps = 5/98 (5%) Strand=Plus/Minus Query 4 AAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGA--ACA-GGGAAGAGCCCAGCG 60 ||||||||||||||||| | ||||||||||||||||||| ||| ||||||||||||||| Sbjct 10931 AAAGAAACTAACCAGGAATTCCTCAGTAACGGCGAGTGATGACAGGGGAAGAGCCCAGCG 10872 Query 61 CCGAATCCCCGCCCCGCGG-TGGGGCGCGGGACATGTG 97 ||| ||||| ||||||| |||||||||||||||||| Sbjct 10871 CCG-ATCCCGAACCCGCGGTTGGGGCGCGGGACATGTG 10835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230335400880