Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= AAMG01000150.1
Length=138
Score E
Sequences producing significant alignments: (Bits) Value
seq3004477 219 3e-55
seq1924671 174 1e-41
seq1924670 168 4e-40
seq1963449 165 5e-39
seq2014059 159 2e-37
seq1811275 158 8e-37
seq2013459 154 1e-35
seq1925646 145 5e-33
seq1925645 145 5e-33
seq1796089 134 9e-30
seq1796726 127 1e-27
seq1822416 120 2e-25
seq1822415 120 2e-25
seq1657965 120 2e-25
seq2184281 111 1e-22
seq2070108 111 1e-22
seq284352 105 4e-21
seq1655929 98.7 7e-19
seq2218699 93.3 3e-17
seq1797321 86.0 4e-15
>seq3004477
Length=691
Score = 219 bits (242), Expect = 3e-55
Identities = 123/124 (99%), Gaps = 0/124 (0%)
Strand=Plus/Plus
Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 77 CCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 136
Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 137 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 196
Query 135 TGTA 138
||||
Sbjct 197 TGTA 200
>seq1924671
Length=127
Score = 174 bits (192), Expect = 1e-41
Identities = 111/121 (92%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74
|||||||| ||||||||| |||||||||||||||||||||||||| ||||||| |||||
Sbjct 7 CCCTACGGCTACCTTGTTACGACTTCACCCCAGTCATGAATCACACCGTGGTAACCGCCC 66
Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 134
|||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct 67 TCCCGAAGGTTAGACTAGCTACTTCTGGTGCAACCCACTCCCATGGTGTGACGGGCGGTG 126
Query 135 T 135
|
Sbjct 127 T 127
>seq1924670
Length=127
Score = 168 bits (186), Expect = 4e-40
Identities = 110/121 (91%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74
|||||||| ||||||||| |||||||||||||||||||||||||| ||||||| || ||
Sbjct 7 CCCTACGGCTACCTTGTTACGACTTCACCCCAGTCATGAATCACACCGTGGTAACCGACC 66
Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 134
|||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct 67 TCCCGAAGGTTAGACTAGCTACTTCTGGTGCAACCCACTCCCATGGTGTGACGGGCGGTG 126
Query 135 T 135
|
Sbjct 127 T 127
>seq1963449
Length=127
Score = 165 bits (182), Expect = 5e-39
Identities = 109/121 (90%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 18 TACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCC 77
||||| ||||||||| |||||||||||||||||||||||||| ||||||| || |||||
Sbjct 127 TACGGCTACCTTGTTACGACTTCACCCCAGTCATGAATCACACCGTGGTAACCGTCCTCC 68
Query 78 CGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGT 137
||| ||||| ||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 67 CGAGGGTTAGACTAGCTACTTCTGGTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGT 8
Query 138 A 138
|
Sbjct 7 A 7
>seq2014059
Length=127
Score = 159 bits (176), Expect = 2e-37
Identities = 106/118 (90%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 21 GGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGA 80
|| ||||||||| |||||||||||||||||||||||||| ||||||| || ||||||||
Sbjct 127 GGCTACCTTGTTACGACTTCACCCCAGTCATGAATCACACCGTGGTAACCGTCCTCCCGA 68
Query 81 AGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGTA 138
||| || ||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 67 AGGGTAGACTAGCTACTTCTGGTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGTA 10
>seq1811275
Length=127
Score = 158 bits (174), Expect = 8e-37
Identities = 105/117 (90%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74
|||||||| ||||||||| |||||||||||||||||||||||||| |||||| || ||
Sbjct 11 CCCTACGGCTACCTTGTTACGACTTCACCCCAGTCATGAATCACACCGTGGTACCCGTCC 70
Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCG 131
|||||||||||| ||| |||||||| |||||||||||||||||||||||||||||
Sbjct 71 TCCCGAAGGTTAGACTAGCTACTTCTGGTGCAACCCACTCCCATGGTGTGACGGGCG 127
>seq2013459
Length=127
Score = 154 bits (170), Expect = 1e-35
Identities = 103/115 (90%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74
|||||||| ||||||||| |||||||||||||||||||||||||| |||| || || ||
Sbjct 13 CCCTACGGCTACCTTGTTACGACTTCACCCCAGTCATGAATCACACCGTGGCAACCGTCC 72
Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGG 129
|||||||||||| ||| |||||||| |||||||||||||||||||||||||||
Sbjct 73 TCCCGAAGGTTAGACTAGCTACTTCTGGTGCAACCCACTCCCATGGTGTGACGGG 127
>seq1925646
Length=127
Score = 145 bits (160), Expect = 5e-33
Identities = 95/105 (90%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 34 CGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTACC 93
|||||||||||||||||||||||||| ||||||| || |||||||||||||| ||| |
Sbjct 125 CGACTTCACCCCAGTCATGAATCACACCGTGGTAACCGTCCTCCCGAAGGTTAGACTAGC 66
Query 94 TACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGTA 138
| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 65 TGCTTCTGGTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGTA 21
>seq1925645
Length=127
Score = 145 bits (160), Expect = 5e-33
Identities = 95/105 (90%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 34 CGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTACC 93
|||||||||||||||||||||||||| ||||||| || |||||||||||||| ||| |
Sbjct 125 CGACTTCACCCCAGTCATGAATCACACCGTGGTAACCGTCCTCCCGAAGGTTAGACTAGC 66
Query 94 TACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGTA 138
| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 65 TTCTTCTGGTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGTA 21
>seq1796089
Length=127
Score = 134 bits (148), Expect = 9e-30
Identities = 89/99 (90%), Gaps = 0/99 (0%)
Strand=Plus/Minus
Query 40 CACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTACCTACTTC 99
|||||||||||||||||||| ||||||| || |||||||||||||| ||| |||||||
Sbjct 127 CACCCCAGTCATGAATCACACCGTGGTAACCGTCCTCCCGAAGGTTAGACTAGCTACTTC 68
Query 100 TTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGTA 138
| |||||||||||||||||||||||||||||||||||
Sbjct 67 TGGGGCAACCCACTCCCATGGTGTGACGGGCGGTGTGTA 29
>seq1796726
Length=127
Score = 127 bits (140), Expect = 1e-27
Identities = 85/95 (89%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 44 CCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTACCTACTTCTTTT 103
|||||||||||||||| ||||||| || |||||||||||||| ||| |||||||| |
Sbjct 127 CCAGTCATGAATCACACCGTGGTAACCGTCCTCCCGAAGGTTAGACTAGCTACTTCTGGT 68
Query 104 GCAACCCACTCCCATGGTGTGACGGGCGGTGTGTA 138
||| |||||||||||||||||||||||||||||||
Sbjct 67 GCACCCCACTCCCATGGTGTGACGGGCGGTGTGTA 33
>seq1822416
Length=127
Score = 120 bits (132), Expect = 2e-25
Identities = 81/91 (89%), Gaps = 0/91 (0%)
Strand=Plus/Minus
Query 48 TCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTACCTACTTCTTTTGCAA 107
|||||||||||| ||||||| || |||||||||||||| ||| |||||||| |||||
Sbjct 127 TCATGAATCACACCGTGGTAACCGTCCTCCCGAAGGTTAGACTAGCTACTTCTGGTGCAA 68
Query 108 CCCACTCCCATGGTGTGACGGGCGGTGTGTA 138
||| |||||||||||||||||||||||||||
Sbjct 67 CCCGCTCCCATGGTGTGACGGGCGGTGTGTA 37
>seq1822415
Length=127
Score = 120 bits (132), Expect = 2e-25
Identities = 81/91 (89%), Gaps = 0/91 (0%)
Strand=Plus/Minus
Query 48 TCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTACCTACTTCTTTTGCAA 107
|||||||||||| ||||||| || |||||||||||||| ||| |||||||| |||||
Sbjct 127 TCATGAATCACACCGTGGTAACCGTCCTCCCGAAGGTTAGACTAGCTACTTCTGGTGCAA 68
Query 108 CCCACTCCCATGGTGTGACGGGCGGTGTGTA 138
||| |||||||||||||||||||||||||||
Sbjct 67 CCCTCTCCCATGGTGTGACGGGCGGTGTGTA 37
>seq1657965
Length=127
Score = 120 bits (132), Expect = 2e-25
Identities = 81/91 (89%), Gaps = 0/91 (0%)
Strand=Plus/Plus
Query 48 TCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTACCTACTTCTTTTGCAA 107
|||||||||||| ||||||| || |||||||||||||| ||| |||||||| |||||
Sbjct 1 TCATGAATCACACCGTGGTAACCGTCCTCCCGAAGGTTAGACTAGCTACTTCTGGTGCAA 60
Query 108 CCCACTCCCATGGTGTGACGGGCGGTGTGTA 138
||| |||||||||||||||||||||||||||
Sbjct 61 CCCCCTCCCATGGTGTGACGGGCGGTGTGTA 91
>seq2184281
Length=127
Score = 111 bits (122), Expect = 1e-22
Identities = 76/86 (88%), Gaps = 0/86 (0%)
Strand=Plus/Minus
Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74
|||||||| ||||||||| ||||||| |||||||||||||||||| ||||||| || ||
Sbjct 90 CCCTACGGCTACCTTGTTACGACTTCGCCCCAGTCATGAATCACACCGTGGTAACCGTCC 31
Query 75 TCCCGAAGGTTAAGCTACCTACTTCT 100
|||||||||||| ||| ||||||||
Sbjct 30 TCCCGAAGGTTAGACTAGCTACTTCT 5
>seq2070108
Length=127
Score = 111 bits (122), Expect = 1e-22
Identities = 76/86 (88%), Gaps = 0/86 (0%)
Strand=Plus/Plus
Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74
|||||||| ||||||||| ||||||| |||||||||||||||||| ||||||| || ||
Sbjct 38 CCCTACGGCTACCTTGTTACGACTTCCCCCCAGTCATGAATCACACCGTGGTAACCGTCC 97
Query 75 TCCCGAAGGTTAAGCTACCTACTTCT 100
|||||||||||| ||| ||||||||
Sbjct 98 TCCCGAAGGTTAGACTAGCTACTTCT 123
>seq284352
Length=588
Score = 105 bits (116), Expect = 4e-21
Identities = 73/83 (88%), Gaps = 0/83 (0%)
Strand=Plus/Minus
Query 18 TACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCC 77
||||| ||||||||| |||||||||||||||||| |||| |||| |||||||||||
Sbjct 87 TACGGCTACCTTGTTACGACTTCACCCCAGTCATCGGCCACACCGTGGCAAGCGCCCTCC 28
Query 78 CGAAGGTTAAGCTACCTACTTCT 100
||||||||||||||||| |||||
Sbjct 27 CGAAGGTTAAGCTACCTGCTTCT 5
>seq1655929
Length=127
Score = 98.7 bits (108), Expect = 7e-19
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74
|||||||| | ||||||| |||||||||||||||||||||||||| ||||||| || ||
Sbjct 54 CCCTACGGCTCCCTTGTTACGACTTCACCCCAGTCATGAATCACACCGTGGTAACCGTCC 113
Query 75 TCCCGAAGGTTA 86
||||||||||||
Sbjct 114 TCCCGAAGGTTA 125
>seq2218699
Length=129
Score = 93.3 bits (102), Expect = 3e-17
Identities = 60/66 (91%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 73 CCTCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGG 132
|||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||
Sbjct 2 CCTCCCGAAGGTTAGACTAGCTACTTCTGGTGCAACCCACTCCCATGGTGTGACGGGCGG 61
Query 133 TGTGTA 138
|| |||
Sbjct 62 TGGGTA 67
>seq1797321
Length=127
Score = 86.0 bits (94), Expect = 4e-15
Identities = 59/67 (88%), Gaps = 0/67 (0%)
Strand=Plus/Plus
Query 9 AGGGAGCCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAA 68
|||| |||||||| ||||||||| |||||||||||||||||||||||||| |||||||
Sbjct 61 AGGGTCCCCTACGGCTACCTTGTTACGACTTCACCCCAGTCATGAATCACACCGTGGTAA 120
Query 69 GCGCCCT 75
|| |||
Sbjct 121 CCGTCCT 127
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 335593224360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |