Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09] 3,088,511 sequences; 2,785,377,831 total letters Query= AAMG01000150.1 Length=138 Score E Sequences producing significant alignments: (Bits) Value seq3004477 219 3e-55 seq1924671 174 1e-41 seq1924670 168 4e-40 seq1963449 165 5e-39 seq2014059 159 2e-37 seq1811275 158 8e-37 seq2013459 154 1e-35 seq1925646 145 5e-33 seq1925645 145 5e-33 seq1796089 134 9e-30 seq1796726 127 1e-27 seq1822416 120 2e-25 seq1822415 120 2e-25 seq1657965 120 2e-25 seq2184281 111 1e-22 seq2070108 111 1e-22 seq284352 105 4e-21 seq1655929 98.7 7e-19 seq2218699 93.3 3e-17 seq1797321 86.0 4e-15 >seq3004477 Length=691 Score = 219 bits (242), Expect = 3e-55 Identities = 123/124 (99%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 77 CCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 136 Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 137 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 196 Query 135 TGTA 138 |||| Sbjct 197 TGTA 200 >seq1924671 Length=127 Score = 174 bits (192), Expect = 1e-41 Identities = 111/121 (92%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74 |||||||| ||||||||| |||||||||||||||||||||||||| ||||||| ||||| Sbjct 7 CCCTACGGCTACCTTGTTACGACTTCACCCCAGTCATGAATCACACCGTGGTAACCGCCC 66 Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 134 |||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||| Sbjct 67 TCCCGAAGGTTAGACTAGCTACTTCTGGTGCAACCCACTCCCATGGTGTGACGGGCGGTG 126 Query 135 T 135 | Sbjct 127 T 127 >seq1924670 Length=127 Score = 168 bits (186), Expect = 4e-40 Identities = 110/121 (91%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74 |||||||| ||||||||| |||||||||||||||||||||||||| ||||||| || || Sbjct 7 CCCTACGGCTACCTTGTTACGACTTCACCCCAGTCATGAATCACACCGTGGTAACCGACC 66 Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 134 |||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||| Sbjct 67 TCCCGAAGGTTAGACTAGCTACTTCTGGTGCAACCCACTCCCATGGTGTGACGGGCGGTG 126 Query 135 T 135 | Sbjct 127 T 127 >seq1963449 Length=127 Score = 165 bits (182), Expect = 5e-39 Identities = 109/121 (90%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 18 TACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCC 77 ||||| ||||||||| |||||||||||||||||||||||||| ||||||| || ||||| Sbjct 127 TACGGCTACCTTGTTACGACTTCACCCCAGTCATGAATCACACCGTGGTAACCGTCCTCC 68 Query 78 CGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGT 137 ||| ||||| ||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct 67 CGAGGGTTAGACTAGCTACTTCTGGTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGT 8 Query 138 A 138 | Sbjct 7 A 7 >seq2014059 Length=127 Score = 159 bits (176), Expect = 2e-37 Identities = 106/118 (90%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 21 GGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGA 80 || ||||||||| |||||||||||||||||||||||||| ||||||| || |||||||| Sbjct 127 GGCTACCTTGTTACGACTTCACCCCAGTCATGAATCACACCGTGGTAACCGTCCTCCCGA 68 Query 81 AGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGTA 138 ||| || ||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct 67 AGGGTAGACTAGCTACTTCTGGTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGTA 10 >seq1811275 Length=127 Score = 158 bits (174), Expect = 8e-37 Identities = 105/117 (90%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74 |||||||| ||||||||| |||||||||||||||||||||||||| |||||| || || Sbjct 11 CCCTACGGCTACCTTGTTACGACTTCACCCCAGTCATGAATCACACCGTGGTACCCGTCC 70 Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCG 131 |||||||||||| ||| |||||||| ||||||||||||||||||||||||||||| Sbjct 71 TCCCGAAGGTTAGACTAGCTACTTCTGGTGCAACCCACTCCCATGGTGTGACGGGCG 127 >seq2013459 Length=127 Score = 154 bits (170), Expect = 1e-35 Identities = 103/115 (90%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74 |||||||| ||||||||| |||||||||||||||||||||||||| |||| || || || Sbjct 13 CCCTACGGCTACCTTGTTACGACTTCACCCCAGTCATGAATCACACCGTGGCAACCGTCC 72 Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGG 129 |||||||||||| ||| |||||||| ||||||||||||||||||||||||||| Sbjct 73 TCCCGAAGGTTAGACTAGCTACTTCTGGTGCAACCCACTCCCATGGTGTGACGGG 127 >seq1925646 Length=127 Score = 145 bits (160), Expect = 5e-33 Identities = 95/105 (90%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 34 CGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTACC 93 |||||||||||||||||||||||||| ||||||| || |||||||||||||| ||| | Sbjct 125 CGACTTCACCCCAGTCATGAATCACACCGTGGTAACCGTCCTCCCGAAGGTTAGACTAGC 66 Query 94 TACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGTA 138 | ||||| |||||||||||||||||||||||||||||||||||| Sbjct 65 TGCTTCTGGTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGTA 21 >seq1925645 Length=127 Score = 145 bits (160), Expect = 5e-33 Identities = 95/105 (90%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 34 CGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTACC 93 |||||||||||||||||||||||||| ||||||| || |||||||||||||| ||| | Sbjct 125 CGACTTCACCCCAGTCATGAATCACACCGTGGTAACCGTCCTCCCGAAGGTTAGACTAGC 66 Query 94 TACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGTA 138 | ||||| |||||||||||||||||||||||||||||||||||| Sbjct 65 TTCTTCTGGTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGTA 21 >seq1796089 Length=127 Score = 134 bits (148), Expect = 9e-30 Identities = 89/99 (90%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 40 CACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTACCTACTTC 99 |||||||||||||||||||| ||||||| || |||||||||||||| ||| ||||||| Sbjct 127 CACCCCAGTCATGAATCACACCGTGGTAACCGTCCTCCCGAAGGTTAGACTAGCTACTTC 68 Query 100 TTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGTA 138 | ||||||||||||||||||||||||||||||||||| Sbjct 67 TGGGGCAACCCACTCCCATGGTGTGACGGGCGGTGTGTA 29 >seq1796726 Length=127 Score = 127 bits (140), Expect = 1e-27 Identities = 85/95 (89%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 44 CCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTACCTACTTCTTTT 103 |||||||||||||||| ||||||| || |||||||||||||| ||| |||||||| | Sbjct 127 CCAGTCATGAATCACACCGTGGTAACCGTCCTCCCGAAGGTTAGACTAGCTACTTCTGGT 68 Query 104 GCAACCCACTCCCATGGTGTGACGGGCGGTGTGTA 138 ||| ||||||||||||||||||||||||||||||| Sbjct 67 GCACCCCACTCCCATGGTGTGACGGGCGGTGTGTA 33 >seq1822416 Length=127 Score = 120 bits (132), Expect = 2e-25 Identities = 81/91 (89%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 48 TCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTACCTACTTCTTTTGCAA 107 |||||||||||| ||||||| || |||||||||||||| ||| |||||||| ||||| Sbjct 127 TCATGAATCACACCGTGGTAACCGTCCTCCCGAAGGTTAGACTAGCTACTTCTGGTGCAA 68 Query 108 CCCACTCCCATGGTGTGACGGGCGGTGTGTA 138 ||| ||||||||||||||||||||||||||| Sbjct 67 CCCGCTCCCATGGTGTGACGGGCGGTGTGTA 37 >seq1822415 Length=127 Score = 120 bits (132), Expect = 2e-25 Identities = 81/91 (89%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 48 TCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTACCTACTTCTTTTGCAA 107 |||||||||||| ||||||| || |||||||||||||| ||| |||||||| ||||| Sbjct 127 TCATGAATCACACCGTGGTAACCGTCCTCCCGAAGGTTAGACTAGCTACTTCTGGTGCAA 68 Query 108 CCCACTCCCATGGTGTGACGGGCGGTGTGTA 138 ||| ||||||||||||||||||||||||||| Sbjct 67 CCCTCTCCCATGGTGTGACGGGCGGTGTGTA 37 >seq1657965 Length=127 Score = 120 bits (132), Expect = 2e-25 Identities = 81/91 (89%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 48 TCATGAATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTACCTACTTCTTTTGCAA 107 |||||||||||| ||||||| || |||||||||||||| ||| |||||||| ||||| Sbjct 1 TCATGAATCACACCGTGGTAACCGTCCTCCCGAAGGTTAGACTAGCTACTTCTGGTGCAA 60 Query 108 CCCACTCCCATGGTGTGACGGGCGGTGTGTA 138 ||| ||||||||||||||||||||||||||| Sbjct 61 CCCCCTCCCATGGTGTGACGGGCGGTGTGTA 91 >seq2184281 Length=127 Score = 111 bits (122), Expect = 1e-22 Identities = 76/86 (88%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74 |||||||| ||||||||| ||||||| |||||||||||||||||| ||||||| || || Sbjct 90 CCCTACGGCTACCTTGTTACGACTTCGCCCCAGTCATGAATCACACCGTGGTAACCGTCC 31 Query 75 TCCCGAAGGTTAAGCTACCTACTTCT 100 |||||||||||| ||| |||||||| Sbjct 30 TCCCGAAGGTTAGACTAGCTACTTCT 5 >seq2070108 Length=127 Score = 111 bits (122), Expect = 1e-22 Identities = 76/86 (88%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74 |||||||| ||||||||| ||||||| |||||||||||||||||| ||||||| || || Sbjct 38 CCCTACGGCTACCTTGTTACGACTTCCCCCCAGTCATGAATCACACCGTGGTAACCGTCC 97 Query 75 TCCCGAAGGTTAAGCTACCTACTTCT 100 |||||||||||| ||| |||||||| Sbjct 98 TCCCGAAGGTTAGACTAGCTACTTCT 123 >seq284352 Length=588 Score = 105 bits (116), Expect = 4e-21 Identities = 73/83 (88%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 18 TACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCC 77 ||||| ||||||||| |||||||||||||||||| |||| |||| ||||||||||| Sbjct 87 TACGGCTACCTTGTTACGACTTCACCCCAGTCATCGGCCACACCGTGGCAAGCGCCCTCC 28 Query 78 CGAAGGTTAAGCTACCTACTTCT 100 ||||||||||||||||| ||||| Sbjct 27 CGAAGGTTAAGCTACCTGCTTCT 5 >seq1655929 Length=127 Score = 98.7 bits (108), Expect = 7e-19 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74 |||||||| | ||||||| |||||||||||||||||||||||||| ||||||| || || Sbjct 54 CCCTACGGCTCCCTTGTTACGACTTCACCCCAGTCATGAATCACACCGTGGTAACCGTCC 113 Query 75 TCCCGAAGGTTA 86 |||||||||||| Sbjct 114 TCCCGAAGGTTA 125 >seq2218699 Length=129 Score = 93.3 bits (102), Expect = 3e-17 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 73 CCTCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGG 132 |||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||| Sbjct 2 CCTCCCGAAGGTTAGACTAGCTACTTCTGGTGCAACCCACTCCCATGGTGTGACGGGCGG 61 Query 133 TGTGTA 138 || ||| Sbjct 62 TGGGTA 67 >seq1797321 Length=127 Score = 86.0 bits (94), Expect = 4e-15 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 9 AGGGAGCCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAA 68 |||| |||||||| ||||||||| |||||||||||||||||||||||||| ||||||| Sbjct 61 AGGGTCCCCTACGGCTACCTTGTTACGACTTCACCCCAGTCATGAATCACACCGTGGTAA 120 Query 69 GCGCCCT 75 || ||| Sbjct 121 CCGTCCT 127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 335593224360