Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq1204 158 5e-36
seq97688 149 3e-33
seq1974099 145 3e-32
seq223402 140 1e-30
seq295917 125 3e-26
seq1641890 123 1e-25
seq2778716 120 1e-24
seq63881 111 6e-22
seq33480 111 6e-22
seq2294442 109 2e-21
seq2015288 109 2e-21
seq371448 109 2e-21
seq2255124 104 9e-20
seq1738563 98.7 4e-18
seq216799 96.9 1e-17
seq114680 89.7 2e-15
seq2710618 84.2 9e-14
seq2136027 84.2 9e-14
seq2018057 84.2 9e-14
seq1967911 84.2 9e-14
seq1651553 84.2 9e-14
seq2175776 80.6 1e-12
seq2001433 80.6 1e-12
seq2025559 77.0 1e-11
seq1855 75.2 5e-11
>seq1204
Length=25311
Score = 158 bits (174), Expect = 5e-36
Identities = 107/120 (89%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 14524 TGTTAGGACCCGAAAGATGGTGAACTATGCCTGAGCAGGGTGAAGCCAGAGGAAACTCTG 14583
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||| || |||||| ||| ||||||||||| ||||| | |||||||||||||||
Sbjct 14584 GTGGAGGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 14643
>seq97688
Length=14902
Score = 149 bits (164), Expect = 3e-33
Identities = 105/120 (88%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct 5464 TGTTAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTG 5405
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||| || |||||| ||| ||||||||||| ||||| | |||||||||||||||
Sbjct 5404 GTGGAGGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCTGACCTGGGTATAGGGGCGA 5345
>seq1974099
Length=127
Score = 145 bits (160), Expect = 3e-32
Identities = 101/115 (88%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628
|||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct 2 GGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGA 61
Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|| || |||||| ||| ||||||||||| ||||| | |||||||||||||||
Sbjct 62 GGGCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 116
>seq223402
Length=9244
Score = 140 bits (154), Expect = 1e-30
Identities = 110/132 (83%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608
||| | ||||| | ||| |||||||||||||||||||||||||||| |||| ||||
Sbjct 8597 GAGCATGAGCACACGCGTTAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAG 8656
Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668
|||||||||||||| ||||||| || |||||| ||| ||||||||| | ||||| ||
Sbjct 8657 CCAGAGGAAACTCTAGTGGAGGTCCGTAGCGGTCCTGACGTGCAAATTGGTCGTCCGATC 8716
Query 669 TGGGTATAGGGG 680
||||||||||||
Sbjct 8717 TGGGTATAGGGG 8728
>seq295917
Length=364
Score = 125 bits (138), Expect = 3e-26
Identities = 128/167 (77%), Gaps = 0/167 (0%)
Strand=Plus/Minus
Query 33 CTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAA 92
|||| | |||||| |||| ||||||||||||| | || | | |||||| | | |||||
Sbjct 311 CTTCCAGGAGTCGGGTTGCTTGGGAATGCAGCCCAAAGCGAGTGGTAAACTCCATCTAAG 252
Query 93 GCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCAC 152
|||||||| ||| ||||||||||| ||||||| ||| | ||||| ||||||| ||
Sbjct 251 GCTAAATACCGGCAGGAGACCGATAGTCAACAAGTACAGTAAGGGAAAGTTGAAAAGAAC 192
Query 153 TTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|||| | |||||||| || || ||||||| ||| | ||| || ||
Sbjct 191 TTTGAAGAGAGAGTTCAAGAGGGCGTGAAACCGTTAAGAGGTAAACG 145
>seq1641890
Length=127
Score = 123 bits (136), Expect = 1e-25
Identities = 91/106 (86%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 578 AGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAG 637
||||||||||||||||||| |||| |||||||||||||||||||||||||| || ||
Sbjct 127 AGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGAGGTCCGTAG 68
Query 638 CGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||| ||| ||||||||||| ||||| | |||||||||||||||
Sbjct 67 CGGGCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 22
>seq2778716
Length=225
Score = 120 bits (132), Expect = 1e-24
Identities = 89/102 (87%), Gaps = 3/102 (3%)
Strand=Plus/Minus
Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624
||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct 225 GTTAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGG 166
Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAA 666
|| | || | |||||| ||| ||||||||||| ||||||||
Sbjct 165 TG--GTCT-GTAGCGGTCCTGACGTGCAAATCGGTCGTCAAA 127
>seq63881
Length=105063
Score = 111 bits (122), Expect = 6e-22
Identities = 96/118 (81%), Gaps = 1/118 (1%)
Strand=Plus/Plus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAAT-AGGGTGAAGCCAGAGGAAACTCT 622
|||| ||| || ||| ||||||||||| |||| | |||| |||||||||||||||||
Sbjct 98972 TGTTAGGATCCAAAACATGGTGAACTAGGCCTNAGGCAGGGCGAAGCCAGAGGAAACTCC 99031
Query 623 GGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGG 680
||||||| || |||||| ||||||||||||||| ||||| | |||||||| |||
Sbjct 99032 AATGGAGGCCCGTAGCGGTCCTGGCGTGCAAATCGGTCGTCCGACCTGGGTATATGGG 99089
Score = 84.2 bits (92), Expect = 9e-14
Identities = 67/81 (83%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 600 AGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGAT 659
|||| ||||||||||||||||| ||||||| || |||||| ||||||| ||||||| |
Sbjct 99128 AGGGCGAAGCCAGAGGAAACTCCAATGGAGGCCCGTAGCGGTCCTGGCGTACAAATCGGT 99187
Query 660 CGTCAAATTTGGGTATAGGGG 680
|||| | |||||||| |||
Sbjct 99188 CGTCCGACCTGGGTATATGGG 99208
>seq33480
Length=9601
Score = 111 bits (122), Expect = 6e-22
Identities = 102/129 (79%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614
||||| | |||| ||||| |||||||||||||||||||||| |||| ||||||||||
Sbjct 1319 GAGCACACATGTTAGGACCAGAAAGATGGTGAACTATGCCTGGGAAGGGCGAAGCCAGAG 1260
Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674
|||||||||||||| | | || ||| ||| ||||||||| || || | ||||||
Sbjct 1259 GAAACTCTGGTGGAAGTCTGTAGTGGTCCTGATGTGCAAATCAGTCTTCCGACCTGGGTA 1200
Query 675 TAGGGGCGA 683
|| ||| ||
Sbjct 1199 TAAGGGGGA 1191
>seq2294442
Length=137
Score = 109 bits (120), Expect = 2e-21
Identities = 83/98 (85%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 586 AACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTG 645
||||||||||| |||| |||||||||||||||||||||||||| || |||||| |||
Sbjct 137 AACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGAGGTCCGTAGCGGTCCTG 78
Query 646 GCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||||||| |||| | |||||||||||||||
Sbjct 77 ACGTGCAAATCGGCCGTCCGACCTGGGTATAGGGGCGA 40
>seq2015288
Length=127
Score = 109 bits (120), Expect = 2e-21
Identities = 83/98 (85%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 586 AACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTG 645
||||||||||| |||| |||||||||||||||||||||||||| || |||||| |||
Sbjct 1 AACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGAGGTCCGTAGCGGTCCTG 60
Query 646 GCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|| |||||||| ||||| | |||||||||||||||
Sbjct 61 ACGGGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 98
>seq371448
Length=8952
Score = 109 bits (120), Expect = 2e-21
Identities = 92/113 (81%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628
|||||||||||||||||||||||| ||| | |||| ||||||||||||||||||| ||||
Sbjct 578 GGACCCGAAAGATGGTGAACTATGACTGGACAGGGCGAAGCCAGAGGAAACTCTGCTGGA 637
Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681
|| || ||| | ||| | || |||||| || || | ||| |||||||||
Sbjct 638 GGTCCGTAGCAGCCCTGACATGTAAATCGGTCATCTGACCTGGTTATAGGGGC 690
>seq2255124
Length=132
Score = 104 bits (114), Expect = 9e-20
Identities = 72/82 (88%), Gaps = 0/82 (0%)
Strand=Plus/Minus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| ||||||||||||||| |||||||||||| |||| |||||||||||||||||||
Sbjct 84 TGTTAGGACCCGAAAGATGGGGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTG 25
Query 624 GTGGAGGCTCGCAGCGGTTCTG 645
||||||| || |||||| |||
Sbjct 24 GTGGAGGTCCGTAGCGGTCCTG 3
>seq1738563
Length=127
Score = 98.7 bits (108), Expect = 4e-18
Identities = 98/126 (78%), Gaps = 2/126 (2%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||||||||||||| | || ||| |||||| | | ||||| |||||||
Sbjct 124 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 65
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
||| ||||||||||| ||||||| || | ||||| ||||||| |||||| |
Sbjct 64 CCCGGCACGAGACCGATAGTCAACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTG--A 7
Query 160 AGAGAG 165
||||||
Sbjct 6 AGAGAG 1
>seq216799
Length=21368
Score = 96.9 bits (106), Expect = 1e-17
Identities = 112/151 (74%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 48 TTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCA 107
||| || |||||||||| | || |||| |||||| | | ||||| |||||||| ||
Sbjct 2593 TTGCTTTGGAATGCAGCCCAAAGTGGGTGGTAAACTCCATCTAAGGCTAAATACCTGCAC 2534
Query 108 GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTT 167
||| | |||| |||||| || | ||||| ||||||| |||||||||||||||||
Sbjct 2533 AAGATCAATAGTCACCAAGTACTGTAAGGGAAAGTTGAAAAGAACTTTGGAAAGAGAGTT 2474
Query 168 AAAAAGCACGTGAAATTGTTGAAAGGGAAGC 198
|| || ||||||| || | ||| ||||
Sbjct 2473 TAAGAGGGCGTGAAACCATTAAGAGGTAAGC 2443
>seq114680
Length=11566
Score = 89.7 bits (98), Expect = 2e-15
Identities = 60/67 (90%), Gaps = 0/67 (0%)
Strand=Plus/Plus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| ||||||| ||||||||||||||||||| |||| |||||||||||||||||||
Sbjct 11485 TGTTAGGACCCGGGAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTG 11544
Query 624 GTGGAGG 630
|||||||
Sbjct 11545 GTGGAGG 11551
>seq2710618
Length=200
Score = 84.2 bits (92), Expect = 9e-14
Identities = 54/59 (92%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCT 622
|||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct 59 TGTTAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCT 1
>seq2136027
Length=127
Score = 84.2 bits (92), Expect = 9e-14
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 610 CAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTT 669
||||||||||||||||||||| || |||||| ||| ||||||||||| ||||| | |
Sbjct 1 CAGAGGAAACTCTGGTGGAGGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCT 60
Query 670 GGGTATAGGGGCGA 683
||| ||||||||||
Sbjct 61 GGGAATAGGGGCGA 74
>seq2018057
Length=127
Score = 84.2 bits (92), Expect = 9e-14
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 610 CAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTT 669
||||||||||||||||||||| || |||||| ||| ||||||||||| ||||| | |
Sbjct 1 CAGAGGAAACTCTGGTGGAGGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCT 60
Query 670 GGGTATAGGGGCGA 683
||| ||||||||||
Sbjct 61 GGGCATAGGGGCGA 74
>seq1967911
Length=127
Score = 84.2 bits (92), Expect = 9e-14
Identities = 85/111 (77%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 72 GGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAG 131
||| |||||| | | ||||| |||||||| ||| ||||||||||| |||||| |
Sbjct 120 GGGTGGTAAACTCCATCTAAGGCTAAATACCGGCACGAGACCGATAGTCAACAAGTGCCG 61
Query 132 TGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAA 182
| | ||||| ||||||| |||||| | |||||||| || || |||||||
Sbjct 60 TAAGGGAAAGTTGAAAAGAACTTTGAAGAGAGAGTTCAAGAGGGCGTGAAA 10
>seq1651553
Length=127
Score = 84.2 bits (92), Expect = 9e-14
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 610 CAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTT 669
||||||||||||||||||||| || |||||| ||| ||||||||||| ||||| | |
Sbjct 127 CAGAGGAAACTCTGGTGGAGGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCT 68
Query 670 GGGTATAGGGGCGA 683
||| ||||||||||
Sbjct 67 GGGGATAGGGGCGA 54
>seq2175776
Length=127
Score = 80.6 bits (88), Expect = 1e-12
Identities = 71/89 (80%), Gaps = 0/89 (0%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||||||||||||| | || ||| |||||| | | ||||| |||||||
Sbjct 99 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGCGGGCGGTAAACTCCATCTAAGGCTAAAT 40
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTA 128
| ||| ||||||||||| |||||||
Sbjct 39 ACCGGCACGAGACCGATAGTCAACAAGTA 11
>seq2001433
Length=127
Score = 80.6 bits (88), Expect = 1e-12
Identities = 71/89 (80%), Gaps = 0/89 (0%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||||||||||||| | || ||| |||||| | | ||||| |||||||
Sbjct 99 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGCGGGGGGTAAACTCCATCTAAGGCTAAAT 40
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTA 128
| ||| ||||||||||| |||||||
Sbjct 39 ACCGGCACGAGACCGATAGTCAACAAGTA 11
>seq2025559
Length=127
Score = 77.0 bits (84), Expect = 1e-11
Identities = 78/102 (76%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||||||||||||| | || ||| || ||| | | ||||| |||||||
Sbjct 26 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGCGGGTGGGAAACTCCATCTAAGGCTAAAT 85
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAG 141
| ||| ||||||||||| ||||||| || | |||||
Sbjct 86 ACCGGCACGAGACCGATAGTCAACAAGTACCGTAAGGGAAAG 127
>seq1855
Length=21409
Score = 75.2 bits (82), Expect = 5e-11
Identities = 55/64 (86%), Gaps = 0/64 (0%)
Strand=Plus/Plus
Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626
||||||| |||| |||||||| ||| | || | |||| |||||||||||||||||||||
Sbjct 9013 TGGGACCTGAAATATGGTGAAATATCCTTGGACAGGGATAAGCCAGAGGAAACTCTGGTG 9072
Query 627 GAGG 630
||||
Sbjct 9073 GAGG 9076
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2013751439050
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