Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= AAMG01000357.1
Length=131
Score E
Sequences producing significant alignments: (Bits) Value
seq246124 147 1e-33
seq2991797 132 3e-29
seq2974776 118 7e-25
seq2955247 118 7e-25
seq2725994 91.5 9e-17
seq785530 87.8 1e-15
seq2645311 82.4 5e-14
>seq246124
Length=1720
Score = 147 bits (162), Expect = 1e-33
Identities = 111/131 (85%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 1 CTGGCGACCCTGCAGGGCTTCAGCATCGGTATCGCCCGCTAGTCGCCCAACTGGATGGTC 60
||||||||| | | |||||||| ||| || | || |||| |||||||||||||||| ||
Sbjct 1025 CTGGCGACCATCCTGGGCTTCATCATTGGCGTGGCGCGCTTGTCGCCCAACTGGATGATC 1084
Query 61 AACAAGCTGGCGACTGTCTACGTCGAGGTGTTCCGTAACATCCCGCCGCTGTTGCAGATC 120
|||||||||||||| || || || || |||||||| ||||| ||||||||| |||| |||
Sbjct 1085 AACAAGCTGGCGACGGTGTATGTGGAAGTGTTCCGCAACATTCCGCCGCTGCTGCAAATC 1144
Query 121 CTGTTCTGGTA 131
|||||||||||
Sbjct 1145 CTGTTCTGGTA 1155
>seq2991797
Length=616
Score = 132 bits (146), Expect = 3e-29
Identities = 108/131 (82%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 1 CTGGCGACCCTGCAGGGCTTCAGCATCGGTATCGCCCGCTAGTCGCCCAACTGGATGGTC 60
||||||||||||| ||||||| |||||| | || || |||||| ||||||||| ||
Sbjct 591 CTGGCGACCCTGCTCGGCTTCATCATCGGCGTGGCGCGACTGTCGCCGAACTGGATGATC 532
Query 61 AACAAGCTGGCGACTGTCTACGTCGAGGTGTTCCGTAACATCCCGCCGCTGTTGCAGATC 120
||||||||||| || || || || || |||||||| ||||| ||||| ||| |||| |||
Sbjct 531 AACAAGCTGGCAACCGTGTATGTGGAAGTGTTCCGCAACATTCCGCCACTGCTGCAAATC 472
Query 121 CTGTTCTGGTA 131
|||||||||||
Sbjct 471 CTGTTCTGGTA 461
>seq2974776
Length=535
Score = 118 bits (130), Expect = 7e-25
Identities = 82/93 (88%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 39 CTAGTCGCCCAACTGGATGGTCAACAAGCTGGCGACTGTCTACGTCGAGGTGTTCCGTAA 98
|| |||||||||||||||| |||||||||||||||| || || || || |||||||| ||
Sbjct 535 CTTGTCGCCCAACTGGATGATCAACAAGCTGGCGACGGTGTATGTGGAAGTGTTCCGCAA 476
Query 99 CATCCCGCCGCTGTTGCAGATCCTGTTCTGGTA 131
|||||||||| || |||| ||||||||||||||
Sbjct 475 CATCCCGCCGTTGCTGCAAATCCTGTTCTGGTA 443
>seq2955247
Length=462
Score = 118 bits (130), Expect = 7e-25
Identities = 91/108 (84%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 24 CATCGGTATCGCCCGCTAGTCGCCCAACTGGATGGTCAACAAGCTGGCGACTGTCTACGT 83
|||||| | || || | |||||||||||||||| ||||||| |||||||| || || ||
Sbjct 460 CATCGGCGTGGCGCGTTTGTCGCCCAACTGGATGATCAACAAACTGGCGACGGTGTATGT 401
Query 84 CGAGGTGTTCCGTAACATCCCGCCGCTGTTGCAGATCCTGTTCTGGTA 131
|| || ||||| |||||||| |||||| |||||||||||||||||||
Sbjct 400 GGAAGTATTCCGCAACATCCCACCGCTGCTGCAGATCCTGTTCTGGTA 353
>seq2725994
Length=205
Score = 91.5 bits (100), Expect = 9e-17
Identities = 74/90 (82%), Gaps = 0/90 (0%)
Strand=Plus/Plus
Query 1 CTGGCGACCCTGCAGGGCTTCAGCATCGGTATCGCCCGCTAGTCGCCCAACTGGATGGTC 60
|||||||| | | |||||||| |||||| | || |||| |||||||||||||||| ||
Sbjct 116 CTGGCGACTATCCTGGGCTTCATCATCGGCGTGGCGCGCTTGTCGCCCAACTGGATGATC 175
Query 61 AACAAGCTGGCGACTGTCTACGTCGAGGTG 90
|||||||||||||| || || || || |||
Sbjct 176 AACAAGCTGGCGACGGTGTATGTGGAAGTG 205
>seq785530
Length=109
Score = 87.8 bits (96), Expect = 1e-15
Identities = 69/83 (83%), Gaps = 0/83 (0%)
Strand=Plus/Minus
Query 1 CTGGCGACCCTGCAGGGCTTCAGCATCGGTATCGCCCGCTAGTCGCCCAACTGGATGGTC 60
||||||||||||| ||||||| |||||| | || || | |||||||||||||||| ||
Sbjct 84 CTGGCGACCCTGCTCGGCTTCATCATCGGCGTGGCGCGTTTGTCGCCCAACTGGATGATC 25
Query 61 AACAAGCTGGCGACTGTCTACGT 83
||||| |||||||| || || ||
Sbjct 24 AACAAACTGGCGACGGTGTATGT 2
>seq2645311
Length=187
Score = 82.4 bits (90), Expect = 5e-14
Identities = 68/83 (82%), Gaps = 0/83 (0%)
Strand=Plus/Minus
Query 1 CTGGCGACCCTGCAGGGCTTCAGCATCGGTATCGCCCGCTAGTCGCCCAACTGGATGGTC 60
||||||||||||| ||||| | |||||| | || || | |||||||||||||||| ||
Sbjct 84 CTGGCGACCCTGCTCGGCTTTATCATCGGCGTGGCGCGTTTGTCGCCCAACTGGATGATC 25
Query 61 AACAAGCTGGCGACTGTCTACGT 83
||||| |||||||| || || ||
Sbjct 24 AACAAACTGGCGACGGTGTATGT 2
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 313841811670
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |