Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= AAMG01000370.1
Length=180
Score E
Sequences producing significant alignments: (Bits) Value
seq2052818 91.5 1e-16
seq2081632 87.8 2e-15
seq2081631 87.8 2e-15
seq1970050 87.8 2e-15
seq1970049 87.8 2e-15
seq1814696 87.8 2e-15
seq2144768 80.6 2e-13
seq210950 77.0 3e-12
seq2144767 75.2 1e-11
>seq2052818
Length=127
Score = 91.5 bits (100), Expect = 1e-16
Identities = 87/110 (79%), Gaps = 1/110 (1%)
Strand=Plus/Plus
Query 6 ACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTAC- 64
||||||||||||| ||| || ||||||| ||| |||||| || |||||||||||| |
Sbjct 1 ACGGTGGATGCCTTGGCAGTCAGAGGCGATGAAAGACGTGGTAGCCTGCGAAAAGCTTCG 60
Query 65 GGGGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC 114
|||| | |||| | | |||||||| |||| || |||||||| |||||
Sbjct 61 GGGGGTCGGCAAACAGACTTTGATCCGGAGATGTCTGAATGGGGGAACCC 110
>seq2081632
Length=127
Score = 87.8 bits (96), Expect = 2e-15
Identities = 85/108 (79%), Gaps = 1/108 (1%)
Strand=Plus/Plus
Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67
||||||||||| ||| || ||||||| ||| |||||| || |||||||||||| ||||
Sbjct 1 GGTGGATGCCTTGGCAGTCAGAGGCGATGAAAGACGTGGTAGCCTGCGAAAAGCTTCGGG 60
Query 68 GA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC 114
|| |||| | | |||||||| |||| || |||||||| |||||
Sbjct 61 GAGACGGCAAACAGACTTTGATCCGGAGATGTCTGAATGGGGGAACCC 108
>seq2081631
Length=127
Score = 87.8 bits (96), Expect = 2e-15
Identities = 85/108 (79%), Gaps = 1/108 (1%)
Strand=Plus/Plus
Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67
||||||||||| ||| || ||||||| ||| |||||| || |||||||||||| ||||
Sbjct 1 GGTGGATGCCTTGGCAGTCAGAGGCGATGAAAGACGTGGTAGCCTGCGAAAAGCTTCGGG 60
Query 68 GA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC 114
|| |||| | | |||||||| |||| || |||||||| |||||
Sbjct 61 GAGGCGGCAAACAGACTTTGATCCGGAGATGTCTGAATGGGGGAACCC 108
>seq1970050
Length=127
Score = 87.8 bits (96), Expect = 2e-15
Identities = 85/108 (79%), Gaps = 1/108 (1%)
Strand=Plus/Plus
Query 2 GCAGACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGC 61
||| ||||||||||||| ||| || ||||||| ||| |||||| | |||||||||||
Sbjct 19 GCATACGGTGGATGCCTTGGCAGTCAGAGGCGATGAAAGACGTGGGAGCCTGCGAAAAGC 78
Query 62 TACGGGGA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGG 108
| |||||| | |||| | | |||||||| |||| || ||||||||
Sbjct 79 TTCGGGGAGTCGGCAAACAGACTTTGATCCGGAGATGTCTGAATGGGG 126
>seq1970049
Length=127
Score = 87.8 bits (96), Expect = 2e-15
Identities = 85/108 (79%), Gaps = 1/108 (1%)
Strand=Plus/Plus
Query 2 GCAGACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGC 61
||| ||||||||||||| ||| || ||||||| ||| |||||| | |||||||||||
Sbjct 19 GCATACGGTGGATGCCTTGGCAGTCAGAGGCGATGAAAGACGTGGAAGCCTGCGAAAAGC 78
Query 62 TACGGGGA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGG 108
| |||||| | |||| | | |||||||| |||| || ||||||||
Sbjct 79 TTCGGGGAGTCGGCAAACAGACTTTGATCCGGAGATGTCTGAATGGGG 126
>seq1814696
Length=127
Score = 87.8 bits (96), Expect = 2e-15
Identities = 85/108 (79%), Gaps = 1/108 (1%)
Strand=Plus/Minus
Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67
||||||||||| ||| || ||||||| ||| |||||| || |||||||||||| ||||
Sbjct 127 GGTGGATGCCTTGGCAGTCAGAGGCGATGAAAGACGTGGTAGCCTGCGAAAAGCTTCGGG 68
Query 68 GA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC 114
|| |||| | | |||||||| |||| || |||||||| |||||
Sbjct 67 GAGCCGGCAAACAGACTTTGATCCGGAGATGTCTGAATGGGGGAACCC 20
>seq2144768
Length=127
Score = 80.6 bits (88), Expect = 2e-13
Identities = 73/91 (80%), Gaps = 1/91 (1%)
Strand=Plus/Minus
Query 25 TCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGGGA-TTGGCACATACGAA 83
|| ||||||| ||| |||||| || |||||||||||| |||||| | |||| | | |
Sbjct 121 TCAGAGGCGATGAAAGACGTGGTAGCCTGCGAAAAGCTTCGGGGAGTCGGCAAACAGGCT 62
Query 84 TTGATCCGTAGATATCCGAATGGGGCAACCC 114
|||||||| |||| || |||||||| |||||
Sbjct 61 TTGATCCGGAGATGTCTGAATGGGGGAACCC 31
>seq210950
Length=3273
Score = 77.0 bits (84), Expect = 3e-12
Identities = 86/115 (75%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 6 ACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACG 65
||||||||||||| | | || |||| ||| |||||||| || | | ||| | ||| ||
Sbjct 2054 ACGGTGGATGCCTTGACACTAGGAGTCGATGAAGGACGGGACTAACGCCGATATGCTTCG 2113
Query 66 GGGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGATATA 120
|||| | | || | |||||||| |||| ||||||||||| ||||| ||||
Sbjct 2114 GGGAGCTGTAAGTAAGCTTTGATCCGAAGATTTCCGAATGGGGAAACCCACTATA 2168
>seq2144767
Length=127
Score = 75.2 bits (82), Expect = 1e-11
Identities = 72/91 (79%), Gaps = 1/91 (1%)
Strand=Plus/Minus
Query 25 TCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGGGA-TTGGCACATACGAA 83
|| ||||||| ||| |||||| || |||||||||||| |||||| | |||| | |
Sbjct 121 TCAGAGGCGATGAAAGACGTGGTAGCCTGCGAAAAGCTTCGGGGAGTCGGCAAACAGTCT 62
Query 84 TTGATCCGTAGATATCCGAATGGGGCAACCC 114
|||||||| |||| || |||||||| |||||
Sbjct 61 TTGATCCGGAGATGTCTGAATGGGGGAACCC 31
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462534167691
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |