Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= AAMG01000567.1
Length=197
Score E
Sequences producing significant alignments: (Bits) Value
seq222150 120 3e-25
seq2156729 82.4 8e-14
seq2156728 82.4 8e-14
seq1994215 82.4 8e-14
seq1964928 82.4 8e-14
seq1919682 82.4 8e-14
seq1695923 82.4 8e-14
seq10722 82.4 8e-14
seq2170463 80.6 3e-13
seq2089151 75.2 1e-11
>seq222150
Length=2306
Score = 120 bits (132), Expect = 3e-25
Identities = 132/175 (75%), Gaps = 3/175 (2%)
Strand=Plus/Minus
Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81
||||||| |||||| |||| || | || || |||||| | ||| ||| |||||
Sbjct 661 CGCAAACCGACACAGGTAGGCGAGGAGAGAATCCTAAGGTGTGCGAGAGAACTCTGGTTA 602
Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGA 141
||||||| |||||| |||||| |||||||||||| || |||| | | | || || |
Sbjct 601 AGGAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGTGCTTTC---TTAACGGAA 545
Query 142 GGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196
| ||||| ||||||| ||| || |||||||| |||||||||||| || ||| ||
Sbjct 544 AGCCGCAGTGAATAGGCCCAAGCGACTGTTTAGCAAAAACACAGGTCTCTGCGAA 490
>seq2156729
Length=127
Score = 82.4 bits (90), Expect = 8e-14
Identities = 75/95 (79%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83
||||| |||||| || || |||| || |||| |||||||||||| || ||| |||
Sbjct 16 CAAACCGACACAGGTGGTTGGGTAGAGAATACCAAGGCGCTTGAGAGAGCTCGGGTGAAG 75
Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAA 118
|||||||||||| || | | |||||||||||| ||
Sbjct 76 GAACTAGGCAAAATGGCACCGTAACTTCGGGAGAA 110
>seq2156728
Length=127
Score = 82.4 bits (90), Expect = 8e-14
Identities = 75/95 (79%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83
||||| |||||| || || |||| || |||| |||||||||||| || ||| |||
Sbjct 16 CAAACCGACACAGGTGGTTGGGTAGAGAATACCAAGGCGCTTGAGAGACCTCGGGTGAAG 75
Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAA 118
|||||||||||| || | | |||||||||||| ||
Sbjct 76 GAACTAGGCAAAATGGCACCGTAACTTCGGGAGAA 110
>seq1994215
Length=127
Score = 82.4 bits (90), Expect = 8e-14
Identities = 75/95 (79%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83
||||| |||||| || || |||| || |||| |||||||||||| ||| || |||
Sbjct 119 CAAACCGACACAGGTGGTTGGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGCGAAG 60
Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAA 118
|||||||||||| || | | |||||||||||| ||
Sbjct 59 GAACTAGGCAAAATGGCACCGTAACTTCGGGAGAA 25
>seq1964928
Length=127
Score = 82.4 bits (90), Expect = 8e-14
Identities = 75/95 (79%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83
||||| |||||| || || |||| || |||| |||||||||||| ||| ||| |||
Sbjct 126 CAAACCGACACAGGTGGTTGGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTGAAG 67
Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAA 118
|| ||||||||| || | | |||||||||||| ||
Sbjct 66 GAGCTAGGCAAAATGGCACCGTAACTTCGGGAGAA 32
>seq1919682
Length=127
Score = 82.4 bits (90), Expect = 8e-14
Identities = 75/95 (79%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83
||||| |||||| || || |||| || |||| |||||||||||| ||| || |||
Sbjct 9 CAAACCGACACAGGTGGTTGGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGAGAAG 68
Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAA 118
|||||||||||| || | | |||||||||||| ||
Sbjct 69 GAACTAGGCAAAATGGCACCGTAACTTCGGGAGAA 103
>seq1695923
Length=127
Score = 82.4 bits (90), Expect = 8e-14
Identities = 75/95 (79%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83
||||| |||||| || || |||| || |||| |||||||||||| ||| || |||
Sbjct 9 CAAACCGACACAGGTGGTTGGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGGGAAG 68
Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAA 118
|||||||||||| || | | |||||||||||| ||
Sbjct 69 GAACTAGGCAAAATGGCACCGTAACTTCGGGAGAA 103
>seq10722
Length=3686
Score = 82.4 bits (90), Expect = 8e-14
Identities = 75/95 (79%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83
||||| |||||| || ||| ||| || |||| |||||||||||| ||| ||| |||
Sbjct 1513 CAAACCGACACAGGTGGTCAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTGAAG 1454
Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAA 118
|||||||||||| || | |||||||||||| ||
Sbjct 1453 GAACTAGGCAAAATGGTGCCGTAACTTCGGGAGAA 1419
>seq2170463
Length=127
Score = 80.6 bits (88), Expect = 3e-13
Identities = 73/92 (79%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83
||||| |||||| || || |||| || || | |||||||||||| ||| ||| |||
Sbjct 34 CAAACCGACACAGGTGGTTGGGTAGAGAATGCCAAGGCGCTTGAGAGAACTCGGGTGAAG 93
Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGA 115
|||||||||||| || | | ||||||||||||
Sbjct 94 GAACTAGGCAAAATGGCACCGTAACTTCGGGA 125
>seq2089151
Length=127
Score = 75.2 bits (82), Expect = 1e-11
Identities = 64/79 (81%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 40 GTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGGAACTAGGCAAACTGA 99
|| |||| || |||| |||||||||||| ||| ||| ||||||||||||||| ||
Sbjct 125 GTTGGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTGAAGGAACTAGGCAAAATGG 66
Query 100 CCCTGTAACTTCGGGATAA 118
||| |||||||||||| ||
Sbjct 65 CCCCGTAACTTCGGGAGAA 47
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515306522394
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |