Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09] 3,088,511 sequences; 2,785,377,831 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq2155659 179 2e-43 seq1855086 179 2e-43 seq1790042 179 2e-43 seq2155645 176 2e-42 seq1875872 167 1e-39 seq1960434 150 8e-35 seq1920785 150 8e-35 seq1706955 131 8e-29 seq2101582 122 4e-26 seq2125146 116 2e-24 seq2080482 104 1e-20 seq2167797 96.9 2e-18 seq1918349 96.9 2e-18 seq102887 89.7 2e-16 >seq2155659 Length=127 Score = 179 bits (198), Expect = 2e-43 Identities = 101/102 (99%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 103 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGGGAACAGGGAAGAGCCCAGCG 44 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 |||||||||||||||||||||||||||||||||||||||||| Sbjct 43 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 2 >seq1855086 Length=127 Score = 179 bits (198), Expect = 2e-43 Identities = 101/102 (99%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 25 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGCGAACAGGGAAGAGCCCAGCG 84 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 |||||||||||||||||||||||||||||||||||||||||| Sbjct 85 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 126 >seq1790042 Length=127 Score = 179 bits (198), Expect = 2e-43 Identities = 101/102 (99%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 125 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 66 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 | |||||||||||||||||||||||||||||||||||||||| Sbjct 65 CTGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 24 >seq2155645 Length=127 Score = 176 bits (194), Expect = 2e-42 Identities = 99/100 (99%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 3 AAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCC 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 127 AAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCC 68 Query 63 GAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||| |||||||||||||||||||||||||||||||||||| Sbjct 67 GAACCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 28 >seq1875872 Length=127 Score = 167 bits (184), Expect = 1e-39 Identities = 94/95 (99%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 33 GGAAAAGAAACTAACCAGGATTCCCTCAGTAGCGGCGAGTGAACAGGGAAGAGCCCAGCG 92 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATG 95 ||||||||||||||||||||||||||||||||||| Sbjct 93 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATG 127 >seq1960434 Length=127 Score = 150 bits (166), Expect = 8e-35 Identities = 85/86 (99%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 17 AGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCCG 76 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 AGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCCG 60 Query 77 CGGTGGGGCGCGGGACATGTGGCGTA 102 ||| |||||||||||||||||||||| Sbjct 61 CGGCGGGGCGCGGGACATGTGGCGTA 86 >seq1920785 Length=127 Score = 150 bits (166), Expect = 8e-35 Identities = 85/86 (99%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 17 AGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCCG 76 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 AGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCCG 60 Query 77 CGGTGGGGCGCGGGACATGTGGCGTA 102 ||| |||||||||||||||||||||| Sbjct 61 CGGGGGGGCGCGGGACATGTGGCGTA 86 >seq1706955 Length=127 Score = 131 bits (144), Expect = 8e-29 Identities = 74/75 (99%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 28 AGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCCGCGGTGGGGCGC 87 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 AGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCCGCGGTGGGGCGC 60 Query 88 GGGACATGTGGCGTA 102 ||| ||||||||||| Sbjct 61 GGGGCATGTGGCGTA 75 >seq2101582 Length=127 Score = 122 bits (134), Expect = 4e-26 Identities = 69/70 (99%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 33 CGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCCGCGGTGGGGCGCGGGAC 92 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 127 CGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCCGCGGTGGGGCGCGGGAC 68 Query 93 ATGTGGCGTA 102 ||| |||||| Sbjct 67 ATGGGGCGTA 58 >seq2125146 Length=127 Score = 116 bits (128), Expect = 2e-24 Identities = 66/67 (99%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 36 CGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATG 95 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 CGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATG 60 Query 96 TGGCGTA 102 ||| ||| Sbjct 61 TGGTGTA 67 >seq2080482 Length=127 Score = 104 bits (114), Expect = 1e-20 Identities = 57/57 (100%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 46 GGGAAGAGCCCAGCGCCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 127 GGGAAGAGCCCAGCGCCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 71 >seq2167797 Length=127 Score = 96.9 bits (106), Expect = 2e-18 Identities = 53/53 (100%), Gaps = 0/53 (0%) Strand=Plus/Plus Query 50 AGAGCCCAGCGCCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 AGAGCCCAGCGCCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 53 >seq1918349 Length=127 Score = 96.9 bits (106), Expect = 2e-18 Identities = 53/53 (100%), Gaps = 0/53 (0%) Strand=Plus/Plus Query 50 AGAGCCCAGCGCCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 AGAGCCCAGCGCCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 53 >seq102887 Length=9891 Score = 89.7 bits (98), Expect = 2e-16 Identities = 51/52 (98%), Gaps = 0/52 (0%) Strand=Plus/Minus Query 51 GAGCCCAGCGCCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 5802 GAGCCCAGCGCCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCATA 5751 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 223728816240