Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= AAMG01000750.1
Length=102
Score E
Sequences producing significant alignments: (Bits) Value
seq2155659 179 2e-43
seq1855086 179 2e-43
seq1790042 179 2e-43
seq2155645 176 2e-42
seq1875872 167 1e-39
seq1960434 150 8e-35
seq1920785 150 8e-35
seq1706955 131 8e-29
seq2101582 122 4e-26
seq2125146 116 2e-24
seq2080482 104 1e-20
seq2167797 96.9 2e-18
seq1918349 96.9 2e-18
seq102887 89.7 2e-16
>seq2155659
Length=127
Score = 179 bits (198), Expect = 2e-43
Identities = 101/102 (99%), Gaps = 0/102 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 103 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGGGAACAGGGAAGAGCCCAGCG 44
Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102
||||||||||||||||||||||||||||||||||||||||||
Sbjct 43 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 2
>seq1855086
Length=127
Score = 179 bits (198), Expect = 2e-43
Identities = 101/102 (99%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 25 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGCGAACAGGGAAGAGCCCAGCG 84
Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102
||||||||||||||||||||||||||||||||||||||||||
Sbjct 85 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 126
>seq1790042
Length=127
Score = 179 bits (198), Expect = 2e-43
Identities = 101/102 (99%), Gaps = 0/102 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 125 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 66
Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102
| ||||||||||||||||||||||||||||||||||||||||
Sbjct 65 CTGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 24
>seq2155645
Length=127
Score = 176 bits (194), Expect = 2e-42
Identities = 99/100 (99%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 3 AAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCC 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 127 AAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCC 68
Query 63 GAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102
||| ||||||||||||||||||||||||||||||||||||
Sbjct 67 GAACCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 28
>seq1875872
Length=127
Score = 167 bits (184), Expect = 1e-39
Identities = 94/95 (99%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 33 GGAAAAGAAACTAACCAGGATTCCCTCAGTAGCGGCGAGTGAACAGGGAAGAGCCCAGCG 92
Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATG 95
|||||||||||||||||||||||||||||||||||
Sbjct 93 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATG 127
>seq1960434
Length=127
Score = 150 bits (166), Expect = 8e-35
Identities = 85/86 (99%), Gaps = 0/86 (0%)
Strand=Plus/Plus
Query 17 AGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCCG 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 AGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCCG 60
Query 77 CGGTGGGGCGCGGGACATGTGGCGTA 102
||| ||||||||||||||||||||||
Sbjct 61 CGGCGGGGCGCGGGACATGTGGCGTA 86
>seq1920785
Length=127
Score = 150 bits (166), Expect = 8e-35
Identities = 85/86 (99%), Gaps = 0/86 (0%)
Strand=Plus/Plus
Query 17 AGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCCG 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 AGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCCG 60
Query 77 CGGTGGGGCGCGGGACATGTGGCGTA 102
||| ||||||||||||||||||||||
Sbjct 61 CGGGGGGGCGCGGGACATGTGGCGTA 86
>seq1706955
Length=127
Score = 131 bits (144), Expect = 8e-29
Identities = 74/75 (99%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 28 AGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCCGCGGTGGGGCGC 87
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 AGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCCGCGGTGGGGCGC 60
Query 88 GGGACATGTGGCGTA 102
||| |||||||||||
Sbjct 61 GGGGCATGTGGCGTA 75
>seq2101582
Length=127
Score = 122 bits (134), Expect = 4e-26
Identities = 69/70 (99%), Gaps = 0/70 (0%)
Strand=Plus/Minus
Query 33 CGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCCGCGGTGGGGCGCGGGAC 92
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 127 CGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCCGCGGTGGGGCGCGGGAC 68
Query 93 ATGTGGCGTA 102
||| ||||||
Sbjct 67 ATGGGGCGTA 58
>seq2125146
Length=127
Score = 116 bits (128), Expect = 2e-24
Identities = 66/67 (99%), Gaps = 0/67 (0%)
Strand=Plus/Plus
Query 36 CGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATG 95
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 CGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATG 60
Query 96 TGGCGTA 102
||| |||
Sbjct 61 TGGTGTA 67
>seq2080482
Length=127
Score = 104 bits (114), Expect = 1e-20
Identities = 57/57 (100%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 46 GGGAAGAGCCCAGCGCCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 127 GGGAAGAGCCCAGCGCCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 71
>seq2167797
Length=127
Score = 96.9 bits (106), Expect = 2e-18
Identities = 53/53 (100%), Gaps = 0/53 (0%)
Strand=Plus/Plus
Query 50 AGAGCCCAGCGCCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 AGAGCCCAGCGCCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 53
>seq1918349
Length=127
Score = 96.9 bits (106), Expect = 2e-18
Identities = 53/53 (100%), Gaps = 0/53 (0%)
Strand=Plus/Plus
Query 50 AGAGCCCAGCGCCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 AGAGCCCAGCGCCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 53
>seq102887
Length=9891
Score = 89.7 bits (98), Expect = 2e-16
Identities = 51/52 (98%), Gaps = 0/52 (0%)
Strand=Plus/Minus
Query 51 GAGCCCAGCGCCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102
||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 5802 GAGCCCAGCGCCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCATA 5751
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 223728816240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |