Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= AAMG01000813.1
Length=105
Score E
Sequences producing significant alignments: (Bits) Value
seq201811 98.7 5e-19
seq3055454 86.0 3e-15
seq141712 86.0 3e-15
seq2829372 82.4 4e-14
seq3065507 77.0 2e-12
>seq201811
Length=1378
Score = 98.7 bits (108), Expect = 5e-19
Identities = 77/92 (84%), Gaps = 0/92 (0%)
Strand=Plus/Minus
Query 14 CTGGTTCTGCCCGAACGGGCGTGCCTTGCCCAGCTCCAGGGTGAAAGCTTCAGCGTCTAG 73
|||||||||||||||||| || |||||||||| ||||||||||| ||||| ||||| ||
Sbjct 628 CTGGTTCTGCCCGAACGGCCGGGCCTTGCCCAATTCCAGGGTGAAGGCTTCGGCGTCCAG 569
Query 74 CTTGTCATAGGTGTAAGCGCTGAAGACGATCG 105
| ||||||||| | ||| ||||| |||||
Sbjct 568 TTGCTCATAGGTGAACGCGGTGAAGGTGATCG 537
>seq3055454
Length=1240
Score = 86.0 bits (94), Expect = 3e-15
Identities = 74/92 (80%), Gaps = 0/92 (0%)
Strand=Plus/Minus
Query 14 CTGGTTCTGCCCGAACGGGCGTGCCTTGCCCAGCTCCAGGGTGAAAGCTTCAGCGTCTAG 73
||||||||| |||||||| || ||||||||||||||||| || || || || |||| ||
Sbjct 171 CTGGTTCTGGCCGAACGGCCGCGCCTTGCCCAGCTCCAGAGTAAACGCCTCGGCGTTCAG 112
Query 74 CTTGTCATAGGTGTAAGCGCTGAAGACGATCG 105
| ||||||||| | ||| ||||| |||||
Sbjct 111 TTGCTCATAGGTGAACGCGGTGAAGGTGATCG 80
>seq141712
Length=747
Score = 86.0 bits (94), Expect = 3e-15
Identities = 74/92 (80%), Gaps = 0/92 (0%)
Strand=Plus/Minus
Query 14 CTGGTTCTGCCCGAACGGGCGTGCCTTGCCCAGCTCCAGGGTGAAAGCTTCAGCGTCTAG 73
||||||||| |||||||| || ||||||||||| |||| |||||||| || |||| ||
Sbjct 502 CTGGTTCTGGCCGAACGGCCGCGCCTTGCCCAGTTCCAAAGTGAAAGCCTCGGCGTTCAG 443
Query 74 CTTGTCATAGGTGTAAGCGCTGAAGACGATCG 105
| ||||||||| | ||| ||||| |||||
Sbjct 442 TTGCTCATAGGTGAACGCGGTGAAGGTGATCG 411
>seq2829372
Length=253
Score = 82.4 bits (90), Expect = 4e-14
Identities = 69/85 (81%), Gaps = 0/85 (0%)
Strand=Plus/Plus
Query 14 CTGGTTCTGCCCGAACGGGCGTGCCTTGCCCAGCTCCAGGGTGAAAGCTTCAGCGTCTAG 73
|||||||||||||||||| || |||||||||| ||||||||||| || || ||||| ||
Sbjct 16 CTGGTTCTGCCCGAACGGCCGGGCCTTGCCCAATTCCAGGGTGAAGGCCTCCGCGTCCAG 75
Query 74 CTTGTCATAGGTGTAAGCGCTGAAG 98
| || ||||| | ||| |||||
Sbjct 76 TTGCTCGTAGGTAAACGCGGTGAAG 100
>seq3065507
Length=1467
Score = 77.0 bits (84), Expect = 2e-12
Identities = 60/72 (83%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 14 CTGGTTCTGCCCGAACGGGCGTGCCTTGCCCAGCTCCAGGGTGAAAGCTTCAGCGTCTAG 73
|||||||||||| ||||| || |||||||||| |||||||||||||| || ||||| |
Sbjct 570 CTGGTTCTGCCCAAACGGCCGCGCCTTGCCCAATTCCAGGGTGAAAGCCTCGGCGTCCAA 511
Query 74 CTTGTCATAGGT 85
|| ||||| ||
Sbjct 510 CTGTTCATACGT 499
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 233050850250
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |