Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= AAMG01001138.1
Length=202
Score E
Sequences producing significant alignments: (Bits) Value
seq10722 143 3e-32
seq2772764 134 1e-29
seq2024926 109 6e-22
seq2024925 109 6e-22
seq2024924 109 6e-22
seq222150 104 2e-20
seq2162000 102 9e-20
seq2104548 102 9e-20
seq1927697 102 9e-20
seq1731886 102 9e-20
seq1652035 102 9e-20
seq2033025 91.5 2e-16
seq2033024 91.5 2e-16
seq1856775 91.5 2e-16
seq2127003 87.8 2e-15
seq2096280 82.4 8e-14
>seq10722
Length=3686
Score = 143 bits (158), Expect = 3e-32
Identities = 122/152 (80%), Gaps = 2/152 (1%)
Strand=Plus/Plus
Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82
|||||||||| |||| |||||||| | |||||||||| | | | |||||||||||
Sbjct 1052 CGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGATTTCAATTTCACTG 1111
Query 83 AGCTCACGGTTG-AGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACC 141
|| || ||| || |||||| ||| |||||||||||||||||||||||||
Sbjct 1112 AG-TCTCGGGTGGAGACAGCCTGGCCATCATTACGCCATTCGTGCAGGTCGGAACTTACC 1170
Query 142 CGACAAGGAATTTCGCTACCTTAGGACCGTTA 173
||||||||||||||||||||||||||||||||
Sbjct 1171 CGACAAGGAATTTCGCTACCTTAGGACCGTTA 1202
>seq2772764
Length=222
Score = 134 bits (148), Expect = 1e-29
Identities = 120/152 (79%), Gaps = 2/152 (1%)
Strand=Plus/Plus
Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82
|||||||||| |||| | |||| | | |||||||||| | | | |||||||||||
Sbjct 71 CGGGGTCTTTCCGTCTTGCCACGGGAACGCTGCATCTTCACAGCGATTTCAATTTCACTG 130
Query 83 AGCTCACGGTTG-AGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACC 141
|| || ||| || |||||| ||| |||||||||||||||||||||||||
Sbjct 131 AG-TCTCGGGTGGAGACAGCGCCGCTGTCGTTACGCCATTCGTGCAGGTCGGAACTTACC 189
Query 142 CGACAAGGAATTTCGCTACCTTAGGACCGTTA 173
||||||||||||||||||||||||||||||||
Sbjct 190 CGACAAGGAATTTCGCTACCTTAGGACCGTTA 221
>seq2024926
Length=127
Score = 109 bits (120), Expect = 6e-22
Identities = 85/103 (83%), Gaps = 2/103 (2%)
Strand=Plus/Plus
Query 72 CAATTTCACTGAGCTCACGGTTG-AGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGT 130
||||||||||||| || ||| || |||||| ||| |||||||||||||
Sbjct 6 CAATTTCACTGAG-TCTCGGGTGGAGACAGCGCCGCCATCGTTACGCCATTCGTGCAGGC 64
Query 131 CGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 65 CGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 107
>seq2024925
Length=127
Score = 109 bits (120), Expect = 6e-22
Identities = 85/103 (83%), Gaps = 2/103 (2%)
Strand=Plus/Plus
Query 72 CAATTTCACTGAGCTCACGGTTG-AGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGT 130
||||||||||||| || ||| || |||||| ||| |||||||||||||
Sbjct 6 CAATTTCACTGAG-TCTCGGGTGGAGACAGCGCCGCCATCGTTACGCCATTCGTGCAGGA 64
Query 131 CGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 65 CGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 107
>seq2024924
Length=127
Score = 109 bits (120), Expect = 6e-22
Identities = 85/103 (83%), Gaps = 2/103 (2%)
Strand=Plus/Plus
Query 72 CAATTTCACTGAGCTCACGGTTG-AGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGT 130
||||||||||||| || ||| || |||||| ||| |||||||||||||
Sbjct 6 CAATTTCACTGAG-TCTCGGGTGGAGACAGCGCCGCCATCGTTACGCCATTCGTGCAGGG 64
Query 131 CGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 65 CGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 107
>seq222150
Length=2306
Score = 104 bits (114), Expect = 2e-20
Identities = 74/90 (82%), Gaps = 0/90 (0%)
Strand=Plus/Plus
Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172
|||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 316 TACACCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 375
Query 173 ANNNNNNNNNNNNNNGTTTACTGGGGCTTC 202
| |||||||||||||||
Sbjct 376 ATAGTTACGGCCGCCGTTTACTGGGGCTTC 405
>seq2162000
Length=127
Score = 102 bits (112), Expect = 9e-20
Identities = 59/61 (97%), Gaps = 0/61 (0%)
Strand=Plus/Plus
Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172
||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 38 TACGCCATTCGTGCAGGTCGGAACTTCCCCGACAAGGAATTTCGCTACCTTAGGACCGTT 97
Query 173 A 173
|
Sbjct 98 A 98
>seq2104548
Length=127
Score = 102 bits (112), Expect = 9e-20
Identities = 59/61 (97%), Gaps = 0/61 (0%)
Strand=Plus/Minus
Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172
||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 90 TACGCCATTCGTGCAGGTCGGAACTTTCCCGACAAGGAATTTCGCTACCTTAGGACCGTT 31
Query 173 A 173
|
Sbjct 30 A 30
>seq1927697
Length=127
Score = 102 bits (112), Expect = 9e-20
Identities = 59/61 (97%), Gaps = 0/61 (0%)
Strand=Plus/Minus
Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172
||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 110 TACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTGCCTTAGGACCGTT 51
Query 173 A 173
|
Sbjct 50 A 50
>seq1731886
Length=127
Score = 102 bits (112), Expect = 9e-20
Identities = 59/61 (97%), Gaps = 0/61 (0%)
Strand=Plus/Plus
Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172
||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 38 TACGCCATTCGTGCAGGTCGGAACTTGCCCGACAAGGAATTTCGCTACCTTAGGACCGTT 97
Query 173 A 173
|
Sbjct 98 A 98
>seq1652035
Length=127
Score = 102 bits (112), Expect = 9e-20
Identities = 59/61 (97%), Gaps = 0/61 (0%)
Strand=Plus/Minus
Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172
||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 110 TACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTCCCTTAGGACCGTT 51
Query 173 A 173
|
Sbjct 50 A 50
>seq2033025
Length=127
Score = 91.5 bits (100), Expect = 2e-16
Identities = 96/128 (75%), Gaps = 2/128 (2%)
Strand=Plus/Plus
Query 29 CTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAGCTCA 88
|||| |||| ||||| || | |||||||||| | | | ||||||||||||| ||
Sbjct 1 CTTTCCGTCTAGCCGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAG-TCT 59
Query 89 CGGTTG-AGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGACAA 147
||| | |||||| ||| |||||||||||||||||||||||||||||||
Sbjct 60 CGGGCGGAGACAGCGCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAA 119
Query 148 GGAATTTC 155
||||||||
Sbjct 120 GGAATTTC 127
>seq2033024
Length=127
Score = 91.5 bits (100), Expect = 2e-16
Identities = 96/128 (75%), Gaps = 2/128 (2%)
Strand=Plus/Plus
Query 29 CTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAGCTCA 88
|||| |||| ||||| || | |||||||||| | | | ||||||||||||| ||
Sbjct 1 CTTTCCGTCTAGCCGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAG-TCT 59
Query 89 CGGTTG-AGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGACAA 147
||| | |||||| ||| |||||||||||||||||||||||||||||||
Sbjct 60 CGGGAGGAGACAGCGCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAA 119
Query 148 GGAATTTC 155
||||||||
Sbjct 120 GGAATTTC 127
>seq1856775
Length=127
Score = 91.5 bits (100), Expect = 2e-16
Identities = 96/128 (75%), Gaps = 2/128 (2%)
Strand=Plus/Minus
Query 29 CTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAGCTCA 88
|||| |||| ||||| || | |||||||||| | | | ||||||||||||| ||
Sbjct 127 CTTTCCGTCTAGCCGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAG-TCT 69
Query 89 CGGTTG-AGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGACAA 147
||| | |||||| ||| |||||||||||||||||||||||||||||||
Sbjct 68 CGGGGGGAGACAGCGCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAA 9
Query 148 GGAATTTC 155
||||||||
Sbjct 8 GGAATTTC 1
>seq2127003
Length=127
Score = 87.8 bits (96), Expect = 2e-15
Identities = 48/48 (100%), Gaps = 0/48 (0%)
Strand=Plus/Plus
Query 126 CAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 CAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 48
>seq2096280
Length=127
Score = 82.4 bits (90), Expect = 8e-14
Identities = 45/45 (100%), Gaps = 0/45 (0%)
Strand=Plus/Plus
Query 129 GTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 45
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 530827803189
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |