Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= AAMG01001435.1
Length=587
Score E
Sequences producing significant alignments: (Bits) Value
seq2927389 545 8e-153
seq2883129 423 7e-116
seq2886027 334 3e-89
seq2805757 311 3e-82
seq2386232 215 2e-53
seq2906812 210 8e-52
seq311712 205 3e-50
seq2954883 172 2e-40
seq2814108 172 2e-40
seq2753338 141 3e-31
seq2259986 129 2e-27
seq1858202 123 9e-26
seq2721167 122 3e-25
seq2145692 118 4e-24
seq1695241 118 4e-24
seq499247 107 7e-21
seq1870728 102 3e-19
>seq2927389
Length=385
Score = 545 bits (604), Expect = 8e-153
Identities = 352/385 (91%), Gaps = 0/385 (0%)
Strand=Plus/Minus
Query 16 GGTTTTGCCACGGTTCCGGCTTACCTGGCCGACCTGTTCGGTACGCAGATGGTCGGTGCG 75
|||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||
Sbjct 385 GGTTTTGCCACGGTCCCGGCTTACCTGGCCGACCTGTTCGGTACGCAAATGGTCGGCGCC 326
Query 76 ATCCACGGTCGCCTGCTGACCGCCTGGGCAGCGGCGGGCGTCTTGGGCCCGGTGTTGGTG 135
||||| ||||||||||||||||||||||| || || ||||| |||||||||||| |||||
Sbjct 325 ATCCATGGTCGCCTGCTGACCGCCTGGGCCGCTGCCGGCGTATTGGGCCCGGTGCTGGTG 266
Query 136 AACTATCTGCGTGAGTATCAGTTGAGCATCGGCGTTGAACGCGCTGCGGCCTATGACATC 195
||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 265 AACTACCTGCGTGAATATCAGTTGAGCATCGGCGTTGAACGCGCTGCGGCCTACGACATC 206
Query 196 ACCTTGTACATCCTCGCTGGCCTGCTGGTGCTGGGGTTCATCTGCAACCTGCTGGTGCGT 255
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 205 ACCTTGTACATCCTCGCTGGCCTGCTGGTGCTGGGCTTCATCTGCAACCTGCTGGTGCGT 146
Query 256 CCGGTGGCCGACAAGTACTTCATGACCGACGCCGAACTGGCCGCCGAGCAAGCGCTGGGG 315
||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||
Sbjct 145 CCGGTGGCCGACAAGTACTTCATGACCGATGCCGAACTCGCCGCCGAGCAGGCGCTGGGC 86
Query 316 CATGACAAAGGCGCCGACGCCAGCACGTCCCTGGAGTGGAAAGCCGCGCCAGGTACTGTG 375
|||||||||||||| ||||||||||| ||||||||||||||| | || || | |
Sbjct 85 CATGACAAAGGCGCTGACGCCAGCACCGTGCTGGAGTGGAAAGCCTCCCCTGGCAGCAAG 26
Query 376 CCATTGGCGATTGCCGCCTGGCTGG 400
||||||||| | |||||||||||||
Sbjct 25 CCATTGGCGGTCGCCGCCTGGCTGG 1
>seq2883129
Length=306
Score = 423 bits (468), Expect = 7e-116
Identities = 270/294 (92%), Gaps = 0/294 (0%)
Strand=Plus/Plus
Query 37 TACCTGGCCGACCTGTTCGGTACGCAGATGGTCGGTGCGATCCACGGTCGCCTGCTGACC 96
|||||||||||||||||||| || ||||||||||| |||||||||||||||||| |||||
Sbjct 2 TACCTGGCCGACCTGTTCGGCACCCAGATGGTCGGCGCGATCCACGGTCGCCTGTTGACC 61
Query 97 GCCTGGGCAGCGGCGGGCGTCTTGGGCCCGGTGTTGGTGAACTATCTGCGTGAGTATCAG 156
|| ||||| ||||||||||| |||||||||||| |||| ||||| |||||||||||||||
Sbjct 62 GCTTGGGCGGCGGCGGGCGTGTTGGGCCCGGTGCTGGTCAACTACCTGCGTGAGTATCAG 121
Query 157 TTGAGCATCGGCGTTGAACGCGCTGCGGCCTATGACATCACCTTGTACATCCTCGCTGGC 216
||||||||||||||||||| || || || ||||||||||||||||| |||||||| |||
Sbjct 122 CTGAGCATCGGCGTTGAACGTGCCGCAGCGTATGACATCACCTTGTATATCCTCGCCGGC 181
Query 217 CTGCTGGTGCTGGGGTTCATCTGCAACCTGCTGGTGCGTCCGGTGGCCGACAAGTACTTC 276
|||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 182 CTGCTGGTGCTGGGCTTCATCTGCAACCTGCTGGTGCGCCCGGTGGCCGACAAGTACTTC 241
Query 277 ATGACCGACGCCGAACTGGCCGCCGAGCAAGCGCTGGGGCATGACAAAGGCGCC 330
||||||||||| |||||||| ||||| || |||||||| |||||||||||||||
Sbjct 242 ATGACCGACGCGGAACTGGCTGCCGAACAGGCGCTGGGCCATGACAAAGGCGCC 295
>seq2886027
Length=310
Score = 334 bits (370), Expect = 3e-89
Identities = 238/273 (87%), Gaps = 0/273 (0%)
Strand=Plus/Plus
Query 1 TCGATGTACGGCGGTGGTTTTGCCACGGTTCCGGCTTACCTGGCCGACCTGTTCGGTACG 60
|||||||||||||| |||||||| || || || || |||||||||||||||||||| ||
Sbjct 38 TCGATGTACGGCGGCGGTTTTGCGACTGTGCCTGCGTACCTGGCCGACCTGTTCGGCACC 97
Query 61 CAGATGGTCGGTGCGATCCACGGTCGCCTGCTGACCGCCTGGGCAGCGGCGGGCGTCTTG 120
|| |||||||| |||||||||||||||||| ||||||| ||||| ||||| ||||| |
Sbjct 98 CAAATGGTCGGCGCGATCCACGGTCGCCTGTTGACCGCATGGGCGGCGGCCGGCGTGCTT 157
Query 121 GGCCCGGTGTTGGTGAACTATCTGCGTGAGTATCAGTTGAGCATCGGCGTTGAACGCGCT 180
||||||||| |||||||||| || || || || || |||||||||||||| ||||||
Sbjct 158 GGCCCGGTGCTGGTGAACTACCTTCGCGAATACCAACTGAGCATCGGCGTTCCGCGCGCT 217
Query 181 GCGGCCTATGACATCACCTTGTACATCCTCGCTGGCCTGCTGGTGCTGGGGTTCATCTGC 240
|||||||| |||||||||||||||||||| || |||||| |||||||||| ||| |||||
Sbjct 218 GCGGCCTACGACATCACCTTGTACATCCTTGCAGGCCTGTTGGTGCTGGGTTTCCTCTGC 277
Query 241 AACCTGCTGGTGCGTCCGGTGGCCGACAAGTAC 273
|||||||||||||| ||||||||||||||||||
Sbjct 278 AACCTGCTGGTGCGCCCGGTGGCCGACAAGTAC 310
>seq2805757
Length=238
Score = 311 bits (344), Expect = 3e-82
Identities = 211/237 (89%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 37 TACCTGGCCGACCTGTTCGGTACGCAGATGGTCGGTGCGATCCACGGTCGCCTGCTGACC 96
|||||||||||||||||||| || ||||||||||| |||||||||||||||||| |||||
Sbjct 2 TACCTGGCCGACCTGTTCGGCACCCAGATGGTCGGCGCGATCCACGGTCGCCTGTTGACC 61
Query 97 GCCTGGGCAGCGGCGGGCGTCTTGGGCCCGGTGTTGGTGAACTATCTGCGTGAGTATCAG 156
|| ||||| ||||| ||||| |||||||||||||||||||||| || || || || ||
Sbjct 62 GCATGGGCGGCGGCTGGCGTGCTGGGCCCGGTGTTGGTGAACTACCTTCGCGAATACCAA 121
Query 157 TTGAGCATCGGCGTTGAACGCGCTGCGGCCTATGACATCACCTTGTACATCCTCGCTGGC 216
||||||| |||||| |||||||||||||| ||||||||||||||||||||||| |||
Sbjct 122 CTGAGCATTGGCGTTCCGCGCGCTGCGGCCTACGACATCACCTTGTACATCCTCGCAGGC 181
Query 217 CTGCTGGTGCTGGGGTTCATCTGCAACCTGCTGGTGCGTCCGGTGGCCGACAAGTAC 273
||| |||||||||| ||| ||||||||||||||||||| ||||||||||||||||||
Sbjct 182 CTGTTGGTGCTGGGTTTCCTCTGCAACCTGCTGGTGCGCCCGGTGGCCGACAAGTAC 238
>seq2386232
Length=149
Score = 215 bits (238), Expect = 2e-53
Identities = 137/149 (92%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 211 GCTGGCCTGCTGGTGCTGGGGTTCATCTGCAACCTGCTGGTGCGTCCGGTGGCCGACAAG 270
|| |||||| |||||||||| ||| ||||||||||||||||||| |||||||||||||||
Sbjct 149 GCAGGCCTGTTGGTGCTGGGTTTCCTCTGCAACCTGCTGGTGCGCCCGGTGGCCGACAAG 90
Query 271 TACTTCATGACCGACGCCGAACTGGCCGCCGAGCAAGCGCTGGGGCATGACAAAGGCGCC 330
|||||||||||||||||||||||||| ||||| || |||||||| |||||||||||||||
Sbjct 89 TACTTCATGACCGACGCCGAACTGGCTGCCGAACAGGCGCTGGGCCATGACAAAGGCGCC 30
Query 331 GACGCCAGCACGTCCCTGGAGTGGAAAGC 359
|| |||||||| || ||||||||||||||
Sbjct 29 GATGCCAGCACTTCGCTGGAGTGGAAAGC 1
>seq2906812
Length=343
Score = 210 bits (232), Expect = 8e-52
Identities = 134/146 (92%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 298 GCCGAGCAAGCGCTGGGGCATGACAAAGGCGCCGACGCCAGCACGTCCCTGGAGTGGAAA 357
||||| || |||||||| ||||||||||||||||| |||||||| || ||||||||||||
Sbjct 2 GCCGAACAGGCGCTGGGCCATGACAAAGGCGCCGATGCCAGCACTTCGCTGGAGTGGAAA 61
Query 358 GCCGCGCCAGGTACTGTGCCATTGGCGATTGCCGCCTGGCTGGTGGTGGGTATTCCGTTG 417
|| || || ||||||||||| ||||||||||||||||||||||||| ||||||||||||
Sbjct 62 GCGGCCCCTGGTACTGTGCCGATGGCGATTGCCGCCTGGCTGGTGGTAGGTATTCCGTTG 121
Query 418 GCGTGGGGTGTGTGGGTGACCCTGCA 443
||||||||||||||||||||||||||
Sbjct 122 GCGTGGGGTGTGTGGGTGACCCTGCA 147
>seq311712
Length=428
Score = 205 bits (226), Expect = 3e-50
Identities = 133/146 (91%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 298 GCCGAGCAAGCGCTGGGGCATGACAAAGGCGCCGACGCCAGCACGTCCCTGGAGTGGAAA 357
||||| || |||||||| ||||||||||||||||| |||||||| || ||||||||||||
Sbjct 2 GCCGAACAGGCGCTGGGCCATGACAAAGGCGCCGATGCCAGCACTTCGCTGGAGTGGAAA 61
Query 358 GCCGCGCCAGGTACTGTGCCATTGGCGATTGCCGCCTGGCTGGTGGTGGGTATTCCGTTG 417
||||| || || | |||||||||||||||||||||||||||||||||||||||||||
Sbjct 62 GCCGCCCCTGGCAGCAAGCCATTGGCGATTGCCGCCTGGCTGGTGGTGGGTATTCCGTTG 121
Query 418 GCGTGGGGTGTGTGGGTGACCCTGCA 443
||||||||||||||||||||||||||
Sbjct 122 GCGTGGGGTGTGTGGGTGACCCTGCA 147
>seq2954883
Length=460
Score = 172 bits (190), Expect = 2e-40
Identities = 137/165 (83%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 279 GACCGACGCCGAACTGGCCGCCGAGCAAGCGCTGGGGCATGACAAAGGCGCCGACGCCAG 338
||||||||| |||||||| ||||| || |||||||| ||||||||||||||| |||
Sbjct 1 GACCGACGCGGAACTGGCTGCCGAACAGGCGCTGGGCCATGACAAAGGCGCCACTGCCTC 60
Query 339 CACGTCCCTGGAGTGGAAAGCCGCGCCAGGTACTGTGCCATTGGCGATTGCCGCCTGGCT 398
||||| ||||||||||| ||| | | | | ||||||||||| || | || |||||
Sbjct 61 TACGTCGCTGGAGTGGAAGGCCTCTTCCGCCAGCGTGCCATTGGCTATCGTGGCGTGGCT 120
Query 399 GGTGGTGGGTATTCCGTTGGCGTGGGGTGTGTGGGTGACCCTGCA 443
||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct 121 GGTAGTGGGCATTCCGTTGGCGTGGGGTGTGTGGGTGACCCTGCA 165
>seq2814108
Length=243
Score = 172 bits (190), Expect = 2e-40
Identities = 137/165 (83%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 279 GACCGACGCCGAACTGGCCGCCGAGCAAGCGCTGGGGCATGACAAAGGCGCCGACGCCAG 338
||||||||| |||||||| ||||| || |||||||| ||||||||||||||| |||
Sbjct 243 GACCGACGCGGAACTGGCTGCCGAACAGGCGCTGGGCCATGACAAAGGCGCCACTGCCTC 184
Query 339 CACGTCCCTGGAGTGGAAAGCCGCGCCAGGTACTGTGCCATTGGCGATTGCCGCCTGGCT 398
|| || ||||||||||| ||| | | | | ||||||||||| || | || |||||
Sbjct 183 TACCTCGCTGGAGTGGAAGGCCTCTTCCGCCAGCGTGCCATTGGCCATCGTGGCGTGGCT 124
Query 399 GGTGGTGGGTATTCCGTTGGCGTGGGGTGTGTGGGTGACCCTGCA 443
|| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 123 GGCGGTGGGTATTCCGTTGGCGTGGGGTGTGTGGGTGACCCTGCA 79
>seq2753338
Length=214
Score = 141 bits (156), Expect = 3e-31
Identities = 89/96 (93%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 1 TCGATGTACGGCGGTGGTTTTGCCACGGTTCCGGCTTACCTGGCCGACCTGTTCGGTACG 60
|||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| ||
Sbjct 96 TCGATGTACGGCGGCGGTTTTGCCACCGTTCCGGCGTACCTGGCCGACCTGTTCGGCACC 37
Query 61 CAGATGGTCGGTGCGATCCACGGTCGCCTGCTGACC 96
||||||||||| |||||||||||||||||| |||||
Sbjct 36 CAGATGGTCGGCGCGATCCACGGTCGCCTGTTGACC 1
>seq2259986
Length=133
Score = 129 bits (142), Expect = 2e-27
Identities = 86/96 (90%), Gaps = 0/96 (0%)
Strand=Plus/Plus
Query 1 TCGATGTACGGCGGTGGTTTTGCCACGGTTCCGGCTTACCTGGCCGACCTGTTCGGTACG 60
|||||||||||||| |||||||| || || || || |||||||||||||||||||| ||
Sbjct 38 TCGATGTACGGCGGCGGTTTTGCGACCGTGCCTGCGTACCTGGCCGACCTGTTCGGCACC 97
Query 61 CAGATGGTCGGTGCGATCCACGGTCGCCTGCTGACC 96
||||||||||| |||||||||||||||||| |||||
Sbjct 98 CAGATGGTCGGCGCGATCCACGGTCGCCTGTTGACC 133
>seq1858202
Length=127
Score = 123 bits (136), Expect = 9e-26
Identities = 74/78 (95%), Gaps = 0/78 (0%)
Strand=Plus/Minus
Query 1 TCGATGTACGGCGGTGGTTTTGCCACGGTTCCGGCTTACCTGGCCGACCTGTTCGGTACG 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 78 TCGATGTACGGCGGTGGTTTTGCCACGGTCCCGGCTTACCTGGCCGACCTGTTCGGTACG 19
Query 61 CAGATGGTCGGTGCGATC 78
|| |||||||| || |||
Sbjct 18 CAAATGGTCGGCGCCATC 1
>seq2721167
Length=203
Score = 122 bits (134), Expect = 3e-25
Identities = 78/85 (92%), Gaps = 0/85 (0%)
Strand=Plus/Minus
Query 1 TCGATGTACGGCGGTGGTTTTGCCACGGTTCCGGCTTACCTGGCCGACCTGTTCGGTACG 60
|||||||||||||| |||||||| || |||||||| |||||||||||||||||||| ||
Sbjct 85 TCGATGTACGGCGGCGGTTTTGCGACCGTTCCGGCCTACCTGGCCGACCTGTTCGGCACC 26
Query 61 CAGATGGTCGGTGCGATCCACGGTC 85
||||||||||| |||||||||||||
Sbjct 25 CAGATGGTCGGCGCGATCCACGGTC 1
>seq2145692
Length=127
Score = 118 bits (130), Expect = 4e-24
Identities = 73/78 (94%), Gaps = 0/78 (0%)
Strand=Plus/Plus
Query 1 TCGATGTACGGCGGTGGTTTTGCCACGGTTCCGGCTTACCTGGCCGACCTGTTCGGTACG 60
|||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 50 TCGATGTACGGCGGGGGTTTTGCCACGGTCCCGGCTTACCTGGCCGACCTGTTCGGTACG 109
Query 61 CAGATGGTCGGTGCGATC 78
|| |||||||| || |||
Sbjct 110 CAAATGGTCGGCGCCATC 127
>seq1695241
Length=127
Score = 118 bits (130), Expect = 4e-24
Identities = 85/98 (87%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 346 CTGGAGTGGAAAGCCGCGCCAGGTACTGTGCCATTGGCGATTGCCGCCTGGCTGGTGGTG 405
||||||||||||||| | || || | |||||||||| | ||||||||||||| ||||
Sbjct 9 CTGGAGTGGAAAGCCTCCCCTGGCAGCAAGCCATTGGCGGTCGCCGCCTGGCTGGGGGTG 68
Query 406 GGTATTCCGTTGGCGTGGGGTGTGTGGGTGACCCTGCA 443
|| ||||||||||| |||||||||||||||||||||||
Sbjct 69 GGCATTCCGTTGGCATGGGGTGTGTGGGTGACCCTGCA 106
>seq499247
Length=102
Score = 107 bits (118), Expect = 7e-21
Identities = 65/69 (94%), Gaps = 0/69 (0%)
Strand=Plus/Plus
Query 375 GCCATTGGCGATTGCCGCCTGGCTGGTGGTGGGTATTCCGTTGGCGTGGGGTGTGTGGGT 434
|||||||||| | |||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct 13 GCCATTGGCGGTCGCCGCCTGGCTGGTGGTGGGCATTCCGTTGGCATGGGGTGTGTGGGT 72
Query 435 GACCCTGCA 443
|||||||||
Sbjct 73 GACCCTGCA 81
>seq1870728
Length=127
Score = 102 bits (112), Expect = 3e-19
Identities = 64/69 (93%), Gaps = 0/69 (0%)
Strand=Plus/Plus
Query 375 GCCATTGGCGATTGCCGCCTGGCTGGTGGTGGGTATTCCGTTGGCGTGGGGTGTGTGGGT 434
|||||||||| | |||||||||||||||||||| ||||||||||| ||||| ||||||||
Sbjct 13 GCCATTGGCGGTCGCCGCCTGGCTGGTGGTGGGCATTCCGTTGGCATGGGGGGTGTGGGT 72
Query 435 GACCCTGCA 443
|||||||||
Sbjct 73 GACCCTGCA 81
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1721148044640
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