Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= AAMG01001502.1
Length=108
Score E
Sequences producing significant alignments: (Bits) Value
seq2694932 178 6e-43
seq2521474 178 6e-43
seq1957059 172 3e-41
seq1831662 168 3e-40
seq450300 100 1e-19
>seq2694932
Length=196
Score = 178 bits (196), Expect = 6e-43
Identities = 104/108 (96%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 1 GACCTGGTCTGAGCCGAGGTAGGCTGATAAGCGATCGGCGAGGGCGTCTATGCTCGGCAA 60
||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 55 GACCTGGTCGGGGCCGAGGTAGGCCGATAAGCGATCGGCGAGGGCGTCTATGCTCGGCAA 114
Query 61 AGTGTGAACTCCTGCCGATGGCTGTGACCCCGCGCCGTGCTACGTCGA 108
|||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 115 AGTGTGAACTCCTGCCGAAGGCTGTGACCCCGCGCCGTGCTACGTCGA 162
>seq2521474
Length=169
Score = 178 bits (196), Expect = 6e-43
Identities = 104/108 (96%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 1 GACCTGGTCTGAGCCGAGGTAGGCTGATAAGCGATCGGCGAGGGCGTCTATGCTCGGCAA 60
||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 41 GACCTGGTCTGGGCCGAGGTAGGCCGATAAGCGATCGGCGAGGGCGTCTATGCTCGGCAA 100
Query 61 AGTGTGAACTCCTGCCGATGGCTGTGACCCCGCGCCGTGCTACGTCGA 108
||| ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 101 AGTATGAACTCCTGCCGTTGGCTGTGACCCCGCGCCGTGCTACGTCGA 148
>seq1957059
Length=127
Score = 172 bits (190), Expect = 3e-41
Identities = 103/108 (95%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 1 GACCTGGTCTGAGCCGAGGTAGGCTGATAAGCGATCGGCGAGGGCGTCTATGCTCGGCAA 60
||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1 GACCTGGTCTGGGCCGAGGTAGGTCGATAAGCGATCGGCGAGGGCGTCTATGCTCGGCAA 60
Query 61 AGTGTGAACTCCTGCCGATGGCTGTGACCCCGCGCCGTGCTACGTCGA 108
||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 61 AGTGTTAACTCCTGCCGTTGGCTGTGACCCCGCGCCGTGCTACGTCGA 108
>seq1831662
Length=127
Score = 168 bits (186), Expect = 3e-40
Identities = 102/108 (94%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 1 GACCTGGTCTGAGCCGAGGTAGGCTGATAAGCGATCGGCGAGGGCGTCTATGCTCGGCAA 60
||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1 GACCTGGTCTGGGCCGAGGTAGGTCGATAAGCGATCGGCGAGGGCGTCTATGCTCGGCAA 60
Query 61 AGTGTGAACTCCTGCCGATGGCTGTGACCCCGCGCCGTGCTACGTCGA 108
||| | ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 61 AGTATTAACTCCTGCCGTTGGCTGTGACCCCGCGCCGTGCTACGTCGA 108
>seq450300
Length=101
Score = 100 bits (110), Expect = 1e-19
Identities = 60/63 (95%), Gaps = 0/63 (0%)
Strand=Plus/Minus
Query 1 GACCTGGTCTGAGCCGAGGTAGGCTGATAAGCGATCGGCGAGGGCGTCTATGCTCGGCAA 60
||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 63 GACCTGGTCTGGGCCGAGGTAGGTCGATAAGCGATCGGCGAGGGCGTCTATGCTCGGCAA 4
Query 61 AGT 63
|||
Sbjct 3 AGT 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 242372884260
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |