Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09] 3,088,511 sequences; 2,785,377,831 total letters Query= AAMG01001528.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq3058615 134 2e-29 >seq3058615 Length=1303 Score = 134 bits (148), Expect = 2e-29 Identities = 115/142 (81%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 149 ACGCTCGGCGACCAGCGTCACCAGAAGGCCGCTTTCGCGGATCATGTGGCCGATGTCCTG 208 |||||| || |||||||| ||||| | ||||| |||||||||||||| |||||||||| Sbjct 27 ACGCTCAGCCACCAGCGTGACCAGCAAACCGCTCTCGCGGATCATGTGCGCGATGTCCTG 86 Query 209 GGCGATGCTGGCCCGATCGTCCACCAGTAGCGGCTGGTTCGAGGGGTCCAGGGTCAGGTC 268 ||||||||||||||| || || | ||| |||||||| ||| |||||||| |||||| Sbjct 87 GGCGATGCTGGCCCGGTCCTCGATCAGCAGCGGCTGACGCGACGGGTCCAGCACCAGGTC 146 Query 269 GTTATTGGTGATCAGCAGATCG 290 ||| | |||||| ||| ||| Sbjct 147 GTTGTCCATGATCAACAGGTCG 168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 804002345181