Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= AAMG01001583.1
Length=657
Score E
Sequences producing significant alignments: (Bits) Value
seq3086847 268 4e-69
seq355878 98.7 4e-18
>seq3086847
Length=4338
Score = 268 bits (296), Expect = 4e-69
Identities = 318/431 (74%), Gaps = 0/431 (0%)
Strand=Plus/Minus
Query 53 ATGGTCAAAGGGATATGGCAAGCGGTTGAGTTTGTTCGCTCCTTCGGTATCAAGCACTTG 112
||||| || ||||| |||| | | ||| ||| |||||||||| ||||||||| ||
Sbjct 1482 ATGGTGAAGGGGATTTGGCGGGGGCTTGGCTTTATTCGCTCCTTTAACATCAAGCACCTG 1423
Query 113 GAGCCGACGGTGCTGCCGGATGAGGTTGAGCAGGTAATCCTTGAGCAGATTGCCAGTGAA 172
|||||||||| | ||| ||||||| | || | |||||||||||||||||||||
Sbjct 1422 GAGCCGACGGCGTTGCTGGATGAGATCCAGGCCCACACCCTTGAGCAGATTGCCAGTGAT 1363
Query 173 CCTGAGGCTTGGCTGGCAATTGTCCCCACGTCCCACAGTGATGCCCAGGCATTGCTTTAC 232
|| ||| |||||||| |||||| |||| || ||||| || ||| ||||||||| |||
Sbjct 1362 CCGCAGGGCTGGCTGGCGATTGTCGCCACCTCTCACAGCGACGCCAGGGCATTGCTCTAC 1303
Query 233 GACGCCCCGGTGCTGGAGTTGAAACGTCAGACCCAGGCAGCCAGCCATTCCGGCAAAGCG 292
||||| ||||| ||| || | || | || || || ||||||||||| ||||| |||
Sbjct 1302 CACGCCAGCGTGCTTGAGCTGCAGCGCCGCACTCAAGCCGCCAGCCATTCTGGCAAGGCG 1243
Query 293 CTGGATGAGTATCGCACCCGTCGGCTGGGCGAGCAGGGCGAGACACGCAGGCGCCGGTTG 352
||| | | || ||| | || || || || ||||| |||||||||| | ||| | ||
Sbjct 1242 CTGCAGGCCTACCGCGCGCGCCGCCTTGGTGAGCAAAGCGAGACACGTACGCGGGCGCTG 1183
Query 353 ATCGCTTTTTTCTCTCCGTTATTCGGGATGTTCAATGATGCCTACGAGTTGCTGCTTGTG 412
| | ||||||| ||| | | |||||| || ||| | | | || |||||||| ||
Sbjct 1182 GTGGGGTTTTTCTGCCCGATGTACGGGATCTTTAATCAATTCCATGAACTGCTGCTTATG 1123
Query 413 GCGCGGCGCTTTCATCGCTATGGGGACCCTCATGATGCCGTTGACGTGGGTTTTATGAGT 472
|||||||| | ||| |||| ||| ||| |||| || || || ||||| ||||||||
Sbjct 1122 GCGCGGCGTTATCACCGCTTTGGCGACGCTCACACGGCGGTCGATGTGGGCTTTATGAGC 1063
Query 473 GCGTTTATGGC 483
|||||| ||||
Sbjct 1062 GCGTTTCTGGC 1052
>seq355878
Length=1118
Score = 98.7 bits (108), Expect = 4e-18
Identities = 98/127 (77%), Gaps = 0/127 (0%)
Strand=Plus/Minus
Query 397 CGAGTTGCTGCTTGTGGCGCGGCGCTTTCATCGCTATGGGGACCCTCATGATGCCGTTGA 456
|||| |||||||| |||||||||||| ||| |||| ||| ||| | || | ||| || ||
Sbjct 973 CGAGCTGCTGCTTATGGCGCGGCGCTATCACCGCTTTGGCGACGCCCACGCTGCGGTCGA 914
Query 457 CGTGGGTTTTATGAGTGCGTTTATGGCGGCTGACCTGCTGACAAACTTTATACCGGGGCC 516
|||||||||||||| ||||| ||||| || || || |||||||| || || ||
Sbjct 913 TGTGGGTTTTATGAGCACGTTTCTGGCGATCGATGTGTTGCTTAACTTTATTCCCGGCCC 854
Query 517 CAAGGGG 523
|||| ||
Sbjct 853 CAAGAGG 847
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1933201381488
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |