Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= AAMG01001603.1
Length=479
Score E
Sequences producing significant alignments: (Bits) Value
seq168358 702 0.0
seq3024467 654 0.0
seq2907907 517 3e-144
seq2880109 457 3e-126
seq2493278 268 3e-69
seq2493279 264 3e-68
seq2070534 197 4e-48
seq2359999 181 3e-43
seq3077726 172 2e-40
seq2141653 147 6e-33
seq3022995 91.5 4e-16
seq2978254 82.4 2e-13
seq2814969 82.4 2e-13
>seq168358
Length=3320
Score = 702 bits (778), Expect = 0.0
Identities = 442/476 (93%), Gaps = 1/476 (0%)
Strand=Plus/Plus
Query 3 AGGTAGTTGCCGCCGATGATGGCGACAAACGCCATGATGATGCCGATCAGGCTCAACACA 62
||||||||||||||||| || ||||||||||||||| ||||||| ||||||||||| |||
Sbjct 2344 AGGTAGTTGCCGCCGATAATCGCGACAAACGCCATGGTGATGCCAATCAGGCTCAAGACA 2403
Query 63 TCCATTAGAGGCAGGCCTCCACCAGATGCTTGCCGATGTCGTCCAGGCTGTAGATGGCGT 122
||||| |||||||||||||||||||||| |||||||||||||||||||| || | ||||
Sbjct 2404 TCCATCAGAGGCAGGCCTCCACCAGATGTTTGCCGATGTCGTCCAGGCTATAAACAGCGT 2463
Query 123 CGGCCAGGTCAGCCTTGACGATGGCCATGGGCATGCCATAGATCACGCAGCTGGCTTCGT 182
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2464 CGGCCAGGTCCGCCTTGACGATGGCCATGGGCATGCCATAGATCACGCAGCTGGCTTCGT 2523
Query 183 CCTGGGCCCAGATCACACTGCCGCCCTGCTTGAGCAGGCGCGCGCCTTCACGGCCGTCGG 242
|||| ||||||||| | ||||||||||||||||||||||| ||||| |||||||||||||
Sbjct 2524 CCTGCGCCCAGATCGCGCTGCCGCCCTGCTTGAGCAGGCGTGCGCCCTCACGGCCGTCGG 2583
Query 243 CGCCCATGCTCGGTGAGGACCACCGCCAGAACTTTGTCGCCGTAGGACTTGGCGGCCGAA 302
||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct 2584 CGCCCATGC-CGGTGAGTACCACCGCCAGAACTTTGTCGCCGTAGGACTTGGCCGCCGAG 2642
Query 303 CCGAAGGTGATGTCCACGCACGGCTTGTAGTTCAGGCGTTCATCCCCCGGCAGGATTTTG 362
||||||||||| |||||||||||||||||||||| ||| || || |||||||||||||||
Sbjct 2643 CCGAAGGTGATATCCACGCACGGCTTGTAGTTCAAGCGCTCGTCGCCCGGCAGGATTTTG 2702
Query 363 ATCGCGCCACGGCCATCCACCATCATCTGCTTGCCACCCGGGGCCAGCAGCGCCAGGCCA 422
|||||||||||||| || ||||||||||||||||| ||||| ||||||||||||||||||
Sbjct 2703 ATCGCGCCACGGCCGTCGACCATCATCTGCTTGCCGCCCGGTGCCAGCAGCGCCAGGCCA 2762
Query 423 GGGCGCAGGATGTCGCCATCCTCGGCTTCCTTGACGCTGATGCGGCACAGATTGTC 478
|| ||||||||||| ||||||||||||||||||||||||||||||||||| || ||
Sbjct 2763 GGTCGCAGGATGTCACCATCCTCGGCTTCCTTGACGCTGATGCGGCACAGCTTATC 2818
>seq3024467
Length=841
Score = 654 bits (724), Expect = 0.0
Identities = 400/424 (94%), Gaps = 1/424 (0%)
Strand=Plus/Minus
Query 55 TCAACACATCCATTAGAGGCAGGCCTCCACCAGATGCTTGCCGATGTCGTCCAGGCTGTA 114
|||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 841 TCAAGACATCCATCAGAGGCAGGCCTCCACCAGATGCTTGCCGATGTCGTCCAGGCTGTA 782
Query 115 GATGGCGTCGGCCAGGTCAGCCTTGACGATGGCCATGGGCATGCCATAGATCACGCAGCT 174
|| ||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct 781 GACCGCGTCAGCCAGGTCGGCCTTGACGATGGCCATGGGCATGCCATAGATCACACAGCT 722
Query 175 GGCTTCGTCCTGGGCCCAGATCACACTGCCGCCCTGCTTGAGCAGGCGCGCGCCTTCACG 234
||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct 721 GGCTTCGTCCTGGGCCCAGATGGCGCTGCCGCCCTGCTTGAGCAGGCGCGCGCCTTCACG 662
Query 235 GCCGTCGGCGCCCATGCTCGGTGAGGACCACCGCCAGAACTTTGTCGCCGTAGGACTTGG 294
||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||
Sbjct 661 GCCGTCGGCGCCCATGC-CGGTGAGCACCACCGCCAGAACTTTGTCGCCATAGGACTTGG 603
Query 295 CGGCCGAACCGAAGGTGATGTCCACGCACGGCTTGTAGTTCAGGCGTTCATCCCCCGGCA 354
| |||||||||||||| ||||||||||||||||||||||||||||| || || || ||||
Sbjct 602 CCGCCGAACCGAAGGTAATGTCCACGCACGGCTTGTAGTTCAGGCGCTCGTCGCCTGGCA 543
Query 355 GGATTTTGATCGCGCCACGGCCATCCACCATCATCTGCTTGCCACCCGGGGCCAGCAGCG 414
|||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 542 GGATCTTGATCGCACCACGGCCGTCCACCATCATCTGCTTGCCACCCGGGGCCAGCAGCG 483
Query 415 CCAGGCCAGGGCGCAGGATGTCGCCATCCTCGGCTTCCTTGACGCTGATGCGGCACAGAT 474
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 482 CCAGGCCAGGGCGCAGGATGTCGCCGTCCTCGGCTTCCTTGACGCTGATGCGGCACAGCT 423
Query 475 TGTC 478
||||
Sbjct 422 TGTC 419
>seq2907907
Length=345
Score = 517 bits (572), Expect = 3e-144
Identities = 323/346 (93%), Gaps = 1/346 (0%)
Strand=Plus/Plus
Query 55 TCAACACATCCATTAGAGGCAGGCCTCCACCAGATGCTTGCCGATGTCGTCCAGGCTGTA 114
|||| |||||||| |||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct 1 TCAAGACATCCATCAGAGGCAGGCCTCCACCAGATGTTTGCCGATGTCGTCCAGGCTATA 60
Query 115 GATGGCGTCGGCCAGGTCAGCCTTGACGATGGCCATGGGCATGCCATAGATCACGCAGCT 174
| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 61 AACCGCGTCAGCCAGGTCCGCCTTGACGATGGCCATGGGCATGCCATAGATCACGCAGCT 120
Query 175 GGCTTCGTCCTGGGCCCAGATCACACTGCCGCCCTGCTTGAGCAGGCGCGCGCCTTCACG 234
|||||||||||||||||||||| | |||||||||||||| |||||||| |||||||||||
Sbjct 121 GGCTTCGTCCTGGGCCCAGATCGCGCTGCCGCCCTGCTTAAGCAGGCGTGCGCCTTCACG 180
Query 235 GCCGTCGGCGCCCATGCTCGGTGAGGACCACCGCCAGAACTTTGTCGCCGTAGGACTTGG 294
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 GCCGTCGGCGCCCATGC-CGGTGAGGACCACCGCCAGAACTTTGTCGCCGTAGGACTTGG 239
Query 295 CGGCCGAACCGAAGGTGATGTCCACGCACGGCTTGTAGTTCAGGCGTTCATCCCCCGGCA 354
| ||||||||||||||||| ||||| |||||||||||||||||||| || || |||||||
Sbjct 240 CCGCCGAACCGAAGGTGATATCCACACACGGCTTGTAGTTCAGGCGCTCGTCGCCCGGCA 299
Query 355 GGATTTTGATCGCGCCACGGCCATCCACCATCATCTGCTTGCCACC 400
|||||||||||||||||||||| || ||||||||||||||||| ||
Sbjct 300 GGATTTTGATCGCGCCACGGCCGTCGACCATCATCTGCTTGCCGCC 345
>seq2880109
Length=302
Score = 457 bits (506), Expect = 3e-126
Identities = 284/303 (94%), Gaps = 1/303 (0%)
Strand=Plus/Plus
Query 173 CTGGCTTCGTCCTGGGCCCAGATCACACTGCCGCCCTGCTTGAGCAGGCGCGCGCCTTCA 232
|||||||||||||||||||| || | ||||||||||||||||||||||| |||||||||
Sbjct 1 CTGGCTTCGTCCTGGGCCCAAATGGCGCTGCCGCCCTGCTTGAGCAGGCGTGCGCCTTCA 60
Query 233 CGGCCGTCGGCGCCCATGCTCGGTGAGGACCACCGCCAGAACTTTGTCGCCGTAGGACTT 292
||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||
Sbjct 61 CGGCCGTCGGCGCCCATGC-CGGTGAGCACCACCGCCAGAACTTTGTCGCCGTAGGATTT 119
Query 293 GGCGGCCGAACCGAAGGTGATGTCCACGCACGGCTTGTAGTTCAGGCGTTCATCCCCCGG 352
|| || || |||||||||||||||||||||||||||||||| ||||| ||||| |||||
Sbjct 120 CGCCGCAGAGCCGAAGGTGATGTCCACGCACGGCTTGTAGTTGAGGCGCTCATCGCCCGG 179
Query 353 CAGGATTTTGATCGCGCCACGGCCATCCACCATCATCTGCTTGCCACCCGGGGCCAGCAG 412
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct 180 CAGGATTTTGATCGCGCCACGGCCATCGACCATCATCTGCTTGCCGCCCGGGGCCAGCAG 239
Query 413 CGCCAGGCCAGGGCGCAGGATGTCGCCATCCTCGGCTTCCTTGACGCTGATGCGGCACAG 472
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 240 CGCCAGGCCAGGACGCAGGATGTCGCCATCCTCGGCTTCCTTGACGCTGATGCGGCACAG 299
Query 473 ATT 475
||
Sbjct 300 CTT 302
>seq2493278
Length=166
Score = 268 bits (296), Expect = 3e-69
Identities = 159/166 (96%), Gaps = 0/166 (0%)
Strand=Plus/Minus
Query 70 GAGGCAGGCCTCCACCAGATGCTTGCCGATGTCGTCCAGGCTGTAGATGGCGTCGGCCAG 129
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 166 GAGGCAGGCCTCCACCAGATGCTTGCCGATGTCGTCCAGGCTGTAGACGGCGTCGGCCAG 107
Query 130 GTCAGCCTTGACGATGGCCATGGGCATGCCATAGATCACGCAGCTGGCTTCGTCCTGGGC 189
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 106 GTCTGCCTTGACGATGGCCATGGGCATGCCATAGATCACGCAGCTGGCTTCGTCCTGGGC 47
Query 190 CCAGATCACACTGCCGCCCTGCTTGAGCAGGCGCGCGCCTTCACGG 235
||| || | ||||||||||||||||||||||| ||||||||||||
Sbjct 46 CCAAATGGCGCTGCCGCCCTGCTTGAGCAGGCGTGCGCCTTCACGG 1
>seq2493279
Length=166
Score = 264 bits (292), Expect = 3e-68
Identities = 158/166 (95%), Gaps = 0/166 (0%)
Strand=Plus/Minus
Query 70 GAGGCAGGCCTCCACCAGATGCTTGCCGATGTCGTCCAGGCTGTAGATGGCGTCGGCCAG 129
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 166 GAGGCAGGCCTCCACCAGATGCTTGCCGATGTCGTCCAGGCTGTAGACGGCGTCGGCCAG 107
Query 130 GTCAGCCTTGACGATGGCCATGGGCATGCCATAGATCACGCAGCTGGCTTCGTCCTGGGC 189
||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct 106 GTCAGCCTTGACGATGGCCATGGGCATGCCATAAATCACGCAACTGGCTTCGTCCTGGGC 47
Query 190 CCAGATCACACTGCCGCCCTGCTTGAGCAGGCGCGCGCCTTCACGG 235
||| || | ||||||||||||||||||||||| ||||||||||||
Sbjct 46 CCAAATGGCGCTGCCGCCCTGCTTGAGCAGGCGTGCGCCTTCACGG 1
>seq2070534
Length=127
Score = 197 bits (218), Expect = 4e-48
Identities = 120/127 (94%), Gaps = 0/127 (0%)
Strand=Plus/Minus
Query 349 CCGGCAGGATTTTGATCGCGCCACGGCCATCCACCATCATCTGCTTGCCACCCGGGGCCA 408
|||||||||||||||||||||||||||| || ||||||||||||||||| ||||| ||||
Sbjct 127 CCGGCAGGATTTTGATCGCGCCACGGCCGTCGACCATCATCTGCTTGCCGCCCGGTGCCA 68
Query 409 GCAGCGCCAGGCCAGGGCGCAGGATGTCGCCATCCTCGGCTTCCTTGACGCTGATGCGGC 468
||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 67 GCAACGCCAGGCCAGGACGCAGGATGTCGCCATCCTCGGCTTCCTTGACGCTGATGCGGC 8
Query 469 ACAGATT 475
|||| ||
Sbjct 7 ACAGCTT 1
>seq2359999
Length=145
Score = 181 bits (200), Expect = 3e-43
Identities = 112/120 (93%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 3 AGGTAGTTGCCGCCGATGATGGCGACAAACGCCATGATGATGCCGATCAGGCTCAACACA 62
||||||||||||||||| || ||||||||||||||| | ||||| ||||||||||| |||
Sbjct 26 AGGTAGTTGCCGCCGATAATCGCGACAAACGCCATGGTAATGCCAATCAGGCTCAATACA 85
Query 63 TCCATTAGAGGCAGGCCTCCACCAGATGCTTGCCGATGTCGTCCAGGCTGTAGATGGCGT 122
||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 86 TCCATCAGAGGCAGGCCTCCACCAGATGCTTGCCGATGTCGTCCAGGCTGTAGACGGCGT 145
>seq3077726
Length=1981
Score = 172 bits (190), Expect = 2e-40
Identities = 103/108 (95%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 3 AGGTAGTTGCCGCCGATGATGGCGACAAACGCCATGATGATGCCGATCAGGCTCAACACA 62
|||||||||||||||||||| ||||||||||||| | ||||||||||||||||||| |||
Sbjct 108 AGGTAGTTGCCGCCGATGATCGCGACAAACGCCAGGGTGATGCCGATCAGGCTCAAGACA 49
Query 63 TCCATTAGAGGCAGGCCTCCACCAGATGCTTGCCGATGTCGTCCAGGC 110
||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 48 TCCATCAGAGGCAGGCCTCCACCAGATGCTTGCCGATGTCGTCCAGGC 1
>seq2141653
Length=127
Score = 147 bits (162), Expect = 6e-33
Identities = 92/99 (93%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 3 AGGTAGTTGCCGCCGATGATGGCGACAAACGCCATGATGATGCCGATCAGGCTCAACACA 62
||||||||||||||||| || |||||||||||||| ||||||| ||||||||||| |||
Sbjct 29 AGGTAGTTGCCGCCGATAATCGCGACAAACGCCATCGTGATGCCAATCAGGCTCAAGACA 88
Query 63 TCCATTAGAGGCAGGCCTCCACCAGATGCTTGCCGATGT 101
||||| |||||||||||||||||||||||||||||||||
Sbjct 89 TCCATCAGAGGCAGGCCTCCACCAGATGCTTGCCGATGT 127
>seq3022995
Length=829
Score = 91.5 bits (100), Expect = 4e-16
Identities = 58/63 (92%), Gaps = 0/63 (0%)
Strand=Plus/Minus
Query 3 AGGTAGTTGCCGCCGATGATGGCGACAAACGCCATGATGATGCCGATCAGGCTCAACACA 62
||||||||||||||||| || ||||||||||||||| ||||||| ||||||||||| |||
Sbjct 63 AGGTAGTTGCCGCCGATAATCGCGACAAACGCCATGGTGATGCCAATCAGGCTCAAGACA 4
Query 63 TCC 65
|||
Sbjct 3 TCC 1
>seq2978254
Length=550
Score = 82.4 bits (90), Expect = 2e-13
Identities = 47/48 (98%), Gaps = 0/48 (0%)
Strand=Plus/Plus
Query 431 GATGTCGCCATCCTCGGCTTCCTTGACGCTGATGCGGCACAGATTGTC 478
|||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1 GATGTCGCCATCCTCGGCTTCCTTGACGCTGATGCGGCACAGCTTGTC 48
>seq2814969
Length=243
Score = 82.4 bits (90), Expect = 2e-13
Identities = 47/48 (98%), Gaps = 0/48 (0%)
Strand=Plus/Plus
Query 431 GATGTCGCCATCCTCGGCTTCCTTGACGCTGATGCGGCACAGATTGTC 478
|||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1 GATGTCGCCATCCTCGGCTTCCTTGACGCTGATGCGGCACAGCTTGTC 48
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1386221938656
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