Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= AAMG01001651.1
Length=155
Score E
Sequences producing significant alignments: (Bits) Value
seq2845283 181 8e-44
seq2852430 178 1e-42
seq3083397 176 3e-42
>seq2845283
Length=265
Score = 181 bits (200), Expect = 8e-44
Identities = 134/155 (86%), Gaps = 1/155 (1%)
Strand=Plus/Plus
Query 1 CCGACCTTCGTGCGCCATGGCAATGCCTTGATCTACTCTATTTCCGGCAGGCCAATGGCC 60
||||||||||||||||||||||| ||||||| || |||||||||||||||| ||||
Sbjct 53 CCGACCTTCGTGCGCCATGGCAAAACCTTGATTTAA-CTATTTCCGGCAGGCCTGAGGCC 111
Query 61 GCTGACATTACTTCTTGATGACACCCACTATGACCGATATCCCTGCCGACCTGCGCTATG 120
||||||||| |||||||| ||||| ||||||| ||||||||||||||||||||| | ||
Sbjct 112 GCTGACATTTCTTCTTGAGGACACAGACTATGAGCGATATCCCTGCCGACCTGCGTTTTG 171
Query 121 CCGATAGTCCCCAATGGGCCCGTCTGGACGCTGAC 155
|||| |||| | | |||||||||||||| || |||
Sbjct 172 CCGAAAGTCACGAGTGGGCCCGTCTGGAAGCCGAC 206
>seq2852430
Length=272
Score = 178 bits (196), Expect = 1e-42
Identities = 133/155 (86%), Gaps = 1/155 (1%)
Strand=Plus/Minus
Query 1 CCGACCTTCGTGCGCCATGGCAATGCCTTGATCTACTCTATTTCCGGCAGGCCAATGGCC 60
||||||||||| ||||||||||| |||||||||| |||||||||||||||| | ||||
Sbjct 220 CCGACCTTCGTACGCCATGGCAAAACCTTGATCTAA-CTATTTCCGGCAGGCCGAAGGCC 162
Query 61 GCTGACATTACTTCTTGATGACACCCACTATGACCGATATCCCTGCCGACCTGCGCTATG 120
||||||||| |||||||| ||||| | ||||| ||||||||| || |||||||| | ||
Sbjct 161 GCTGACATTTCTTCTTGAGGACACAGATTATGAGCGATATCCCAGCTGACCTGCGTTTTG 102
Query 121 CCGATAGTCCCCAATGGGCCCGTCTGGACGCTGAC 155
|||| |||| | |||||||||||||||| || |||
Sbjct 101 CCGAAAGTCACGAATGGGCCCGTCTGGAAGCCGAC 67
>seq3083397
Length=2697
Score = 176 bits (194), Expect = 3e-42
Identities = 134/156 (86%), Gaps = 2/156 (1%)
Strand=Plus/Minus
Query 1 CCGACCTTCGTGCGCCATGGCAATGCCTTGATCTACTCTATTT-CCGGCAGGCCAATGGC 59
||||||||||| ||||||||||| |||||||||| |||||| ||||||||||| ||||
Sbjct 1788 CCGACCTTCGTCCGCCATGGCAAAACCTTGATCTAA-CTATTTTCCGGCAGGCCACTGGC 1730
Query 60 CGCTGACATTACTTCTTGATGACACCCACTATGACCGATATCCCTGCCGACCTGCGCTAT 119
|||||||||| |||||||| ||||| ||||||| | ||||||||||||||||||| | |
Sbjct 1729 CGCTGACATTTCTTCTTGAGGACACAGACTATGAGCAATATCCCTGCCGACCTGCGTTTT 1670
Query 120 GCCGATAGTCCCCAATGGGCCCGTCTGGACGCTGAC 155
||||| |||| | |||||||||||||| || |||
Sbjct 1669 GCCGAAAGTCATGAGTGGGCCCGTCTGGAAGCCGAC 1634
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 384927763716
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |