Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= AAMG01001690.1
Length=455
Score E
Sequences producing significant alignments: (Bits) Value
seq2937777 480 2e-133
seq2693880 336 6e-90
seq2657603 331 2e-88
seq2273485 237 4e-60
seq2037928 215 1e-53
seq2022895 212 2e-52
seq1139095 203 9e-50
seq1003053 201 3e-49
seq408065 172 1e-40
seq2226900 170 5e-40
seq2225028 161 3e-37
seq2997310 152 1e-34
seq2903991 134 4e-29
>seq2937777
Length=410
Score = 480 bits (532), Expect = 2e-133
Identities = 278/286 (97%), Gaps = 0/286 (0%)
Strand=Plus/Plus
Query 1 CGATCAGGAACACTTCACGGGCACCGGCGCCAAGGGCCGATTCACGGATGGCACGACGCT 60
|||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 125 CGATCAGGAATACTTCGCGGGCACCGGCGCCAAGGGCCGATTCACGGATGGCACGACGCT 184
Query 61 CCACCTGGGTGGACTTGCACGGAACGCAGATCAGCACACGAGGGCTGGGCTGCAGGAAAC 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 185 CAACCTGGGTGGACTTGCACGGAACGCAGATCAGCACACGAGGGCTGGGCTGCAGGAAAC 244
Query 121 TGTTTTCGTGAACCTTGTTGATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGTCGG 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 245 TGTTTTCGTGAACCTTGTTGATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGTCGG 304
Query 181 CGATCACGCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGAGCA 240
||||||||||||| |||||||||||||||||||| || ||||||||||| ||||||||||
Sbjct 305 CGATCACGCCGTCCTTCATCGGACGAATGGCAGCGATGTTGCCTGGTGTTCGGCCGAGCA 364
Query 241 TGCGCTTGGCCTCGGTGCCGACGGCAACGACACTTTTCTGATTACC 286
||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 365 TGCGCTTGGCCTCGGTGCCAACGGCAACGACACTTTTCTGATTACC 410
>seq2693880
Length=196
Score = 336 bits (372), Expect = 6e-90
Identities = 192/196 (98%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 98 ACGAGGGCTGGGCTGCAGGAAACTGTTTTCGTGAACCTTGTTGATGAAGTACTGCAGCAT 157
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ACGAGGGCTGGGCTGCAGAAAACTGTTTTCGTGAACCTTGTTGATGAAGTACTGCAGCAT 60
Query 158 CTTCTCGCAGACGCTGAAGTCGGCGATCACGCCGTCTTTCATCGGACGAATGGCAGCAAT 217
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 CTTCTCGCAGACACTGAAGTCGGCGATCACGCCGTCTTTCATCGGACGAATGGCAGCAAT 120
Query 218 ATTGCCTGGTGTACGGCCGAGCATGCGCTTGGCCTCGGTGCCGACGGCAACGACACTTTT 277
|||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 121 ATTGCCGGGTGTACGGCCGAGCATGCGCTTGGCCTCGGTGCCAACGGCAACGACACTTTT 180
Query 278 CTGATTACCATGGGTC 293
||||||||||||||||
Sbjct 181 CTGATTACCATGGGTC 196
>seq2657603
Length=189
Score = 331 bits (366), Expect = 2e-88
Identities = 186/188 (99%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 135 TTGTTGATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGTCGGCGATCACGCCGTCT 194
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 189 TTGTTGATGAAGTACTGCAGCATCTTTTCGCAGACGCTGAAGTCGGCGATCACGCCGTCT 130
Query 195 TTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGAGCATGCGCTTGGCCTCG 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 129 TTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGAGCATGCGCTTGGCCTCG 70
Query 255 GTGCCGACGGCAACGACACTTTTCTGATTACCATGGGTCCGAATGGCCACAACCGATGGC 314
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 69 GTGCCTACGGCAACGACACTTTTCTGATTACCATGGGTCCGAATGGCCACAACCGATGGC 10
Query 315 TCATTCAG 322
||||||||
Sbjct 9 TCATTCAG 2
>seq2273485
Length=134
Score = 237 bits (262), Expect = 4e-60
Identities = 133/134 (99%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 288 TGGGTCCGAATGGCCACAACCGATGGCTCATTCAGGACGATACCGCGCTCGCGCACGTAA 347
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1 TGGGTCCGAATGGCCACAACCGATGGCTCATTCAGAACGATACCGCGCTCGCGCACGTAA 60
Query 348 ATAAGGGTGTTGGCAGTGCCCAGGTCAATGGAAAGATCGCTGGAAAACATGCCACGCAGT 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 ATAAGGGTGTTGGCAGTGCCCAGGTCAATGGAAAGATCGCTGGAAAACATGCCACGCAGT 120
Query 408 TTCTTGAACATGGG 421
||||||||||||||
Sbjct 121 TTCTTGAACATGGG 134
>seq2037928
Length=127
Score = 215 bits (238), Expect = 1e-53
Identities = 124/127 (98%), Gaps = 0/127 (0%)
Strand=Plus/Minus
Query 71 GGACTTGCACGGAACGCAGATCAGCACACGAGGGCTGGGCTGCAGGAAACTGTTTTCGTG 130
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 127 GGACTTGCACGGAACGCAGATCAGCACACGAGGGCTGGGCTGCAGAAAACTGTTTTCGTG 68
Query 131 AACCTTGTTGATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGTCGGCGATCACGCC 190
||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 67 AACTTTGTTGATGAAGTACTGCAGCATCTTTTCGCAGACGCTGAAGTCGGCGATCACGCC 8
Query 191 GTCTTTC 197
|||||||
Sbjct 7 GTCTTTC 1
>seq2022895
Length=127
Score = 212 bits (234), Expect = 2e-52
Identities = 123/127 (97%), Gaps = 0/127 (0%)
Strand=Plus/Plus
Query 224 TGGTGTACGGCCGAGCATGCGCTTGGCCTCGGTGCCGACGGCAACGACACTTTTCTGATT 283
|||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1 TGGTGTTCGGCCGAGCATGCGCTTGGCCTCGGTGCCAACGGCAACGACACTTTTCTGATT 60
Query 284 ACCATGGGTCCGAATGGCCACAACCGATGGCTCATTCAGGACGATACCGCGCTCGCGCAC 343
||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 61 ACCGTGGGTCCGAATGGCCACAACCGATGGCTCATTCAGAACGATACCGCGCTCGCGCAC 120
Query 344 GTAAATA 350
|||||||
Sbjct 121 GTAAATA 127
>seq1139095
Length=117
Score = 203 bits (224), Expect = 9e-50
Identities = 115/117 (98%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 30 CCAAGGGCCGATTCACGGATGGCACGACGCTCCACCTGGGTGGACTTGCACGGAACGCAG 89
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1 CCAAGGGCCGATTCACGGATGGCACGACGCTCCACCTGGGTGGACTTGCACGGGACGCAG 60
Query 90 ATCAGCACACGAGGGCTGGGCTGCAGGAAACTGTTTTCGTGAACCTTGTTGATGAAG 146
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 61 ATCAGCACACGAGGGCTGGGCTGCAGAAAACTGTTTTCGTGAACCTTGTTGATGAAG 117
>seq1003053
Length=114
Score = 201 bits (222), Expect = 3e-49
Identities = 113/114 (99%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 20 GGCACCGGCGCCAAGGGCCGATTCACGGATGGCACGACGCTCCACCTGGGTGGACTTGCA 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GGCACCGGCGCCAAGGGCCGATTCACGGATGGCACGACGCTCCACCTGGGTGGACTTGCA 60
Query 80 CGGAACGCAGATCAGCACACGAGGGCTGGGCTGCAGGAAACTGTTTTCGTGAAC 133
|||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 61 CGGAACGCAGATCAGCACACGAGGGCTGGGCTGCAGAAAACTGTTTTCGTGAAC 114
>seq408065
Length=100
Score = 172 bits (190), Expect = 1e-40
Identities = 98/100 (98%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 98 ACGAGGGCTGGGCTGCAGGAAACTGTTTTCGTGAACCTTGTTGATGAAGTACTGCAGCAT 157
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ACGAGGGCTGGGCTGCAGAAAACTGTTTTCGTGAACCTTGTTGATGAAGTACTGCAGCAT 60
Query 158 CTTCTCGCAGACGCTGAAGTCGGCGATCACGCCGTCTTTC 197
||| ||||||||||||||||||||||||||||||||||||
Sbjct 61 CTTTTCGCAGACGCTGAAGTCGGCGATCACGCCGTCTTTC 100
>seq2226900
Length=130
Score = 170 bits (188), Expect = 5e-40
Identities = 96/97 (99%), Gaps = 0/97 (0%)
Strand=Plus/Plus
Query 359 GGCAGTGCCCAGGTCAATGGAAAGATCGCTGGAAAACATGCCACGCAGTTTCTTGAACAT 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GGCAGTGCCCAGGTCAATGGAAAGATCGCTGGAAAACATGCCACGCAGTTTCTTGAACAT 60
Query 419 GGGGAAAGGACCCTAAGCAACGCGTGGGTAAAAAAGT 455
||||||||||||||| |||||||||||||||||||||
Sbjct 61 GGGGAAAGGACCCTAGGCAACGCGTGGGTAAAAAAGT 97
>seq2225028
Length=130
Score = 161 bits (178), Expect = 3e-37
Identities = 94/97 (97%), Gaps = 0/97 (0%)
Strand=Plus/Minus
Query 359 GGCAGTGCCCAGGTCAATGGAAAGATCGCTGGAAAACATGCCACGCAGTTTCTTGAACAT 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 130 GGCAGTGCCCAGGTCAATGGAAAGATCGCTGGAAAACATGCCACGCAGTTTCTTGAACAT 71
Query 419 GGGGAAAGGACCCTAAGCAACGCGTGGGTAAAAAAGT 455
||| || |||||||| |||||||||||||||||||||
Sbjct 70 GGGAAAGGGACCCTAGGCAACGCGTGGGTAAAAAAGT 34
>seq2997310
Length=647
Score = 152 bits (168), Expect = 1e-34
Identities = 89/92 (97%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 1 CGATCAGGAACACTTCACGGGCACCGGCGCCAAGGGCCGATTCACGGATGGCACGACGCT 60
|||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct 556 CGATCAGGAACACTTCGCGGGCACCGGCACCAAGGGCCGATTCACGGATGGCACGACGCT 615
Query 61 CCACCTGGGTGGACTTGCACGGAACGCAGATC 92
|||||||||||||||||||||| |||||||||
Sbjct 616 CCACCTGGGTGGACTTGCACGGGACGCAGATC 647
>seq2903991
Length=338
Score = 134 bits (148), Expect = 4e-29
Identities = 79/82 (96%), Gaps = 0/82 (0%)
Strand=Plus/Plus
Query 1 CGATCAGGAACACTTCACGGGCACCGGCGCCAAGGGCCGATTCACGGATGGCACGACGCT 60
|||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct 257 CGATCAGGAACACTTCGCGGGCACCGGCGCCAAGAGCCGATTCACGGATGGCGCGACGCT 316
Query 61 CCACCTGGGTGGACTTGCACGG 82
||||||||||||||||||||||
Sbjct 317 CCACCTGGGTGGACTTGCACGG 338
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1311793915104
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