Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09] 3,088,511 sequences; 2,785,377,831 total letters Query= AAMG01001718.1 Length=235 Score E Sequences producing significant alignments: (Bits) Value seq3001444 260 2e-67 >seq3001444 Length=672 Score = 260 bits (288), Expect = 2e-67 Identities = 198/234 (85%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 2 GAGCGCCACGACAAAAGCGTTACCCCTTTTGCCCGCCAGCTCGGCTGGCAACCGGCGCCG 61 |||||||||||| ||||| | ||||| ||||||||||| || ||||||||||| |||||| Sbjct 242 GAGCGCCACGACGAAAGCATCACCCCCTTTGCCCGCCAACTGGGCTGGCAACCCGCGCCG 183 Query 62 GATGACGACAGCCTGATCGCGGCAGATCGCATCTTCATCAAGCACGGCTATGCGCCCACG 121 |||||||||||||||||||| || || |||||||||||||| |||||||| ||||| || Sbjct 182 GATGACGACAGCCTGATCGCAGCCGAGCGCATCTTCATCAAACACGGCTACGCGCCGACA 123 Query 122 CCCGAGACGATTGCCTACCTCAAAAGCCTGGCGCCGGCGCGTGTATTGGTGTGTGGAATA 181 ||||| ||| | | |||||| |||||||||||||||| ||| || |||||||||| | Sbjct 122 CCCGAAACGCTGGGCTACCTGAAAAGCCTGGCGCCGGAGCGCGTGCTGGTGTGTGGCCTT 63 Query 182 CAAACCGACACCTGCGTGCTGGCGGCGGGGTTTGCCCTGTTTGATGCGGGGTTG 235 |||||||| || |||||||||||||| ||||| || | ||||| || || ||| Sbjct 62 CAAACCGATACGTGCGTGCTGGCGGCCGGGTTCGCGTTATTTGACGCCGGCTTG 9 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633268256436